Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0099 ATGGGTATGTCTAATAACTCAAATGGGAGTACAACTGGTTCAAGATGGAACCCTACAAAAGAACAAATAAGCATGTTGGAGAATCTGTATGAGCAGGGAATTAGGACACCAAGTGAGGAACAAATTAAGCAGATAACTTCTAGTCTCAAGGCTTATGGTCATATTGAAGGAAAGAATGTCTTTTACTGGTTTCAGAATCACAAAGCTAGACAGAGGCAGAAGCAGAAACAAGAGAGTATTGCATATTACAATCGCTATATTCATGCCTCTCAGCCAAATATTTTCTCTTCCCCACAACAATATCAAAATGTTATGTGCCAACCATATTGCCTGCCAAAGAATGAAGTCACCTTTTATTCTCAACACCCGAATCTGATTGGACCTGGATGCATTAGCCCAAGGACTGAGAAATTTGTGCCTATGGCGATGTCAAGATTCAGTAATGACCAACAGATATATGAACAATTCCAGTTTCAACAGAGGAATCTGGGTTATTATAACGTTAGCAACAATAATAACCATGAAGAAACGTTGACTCTCTTTCCATTACACCCAACCGGCATTTTGGAATCAAAATCAAAAGAACGCGTGTCTTATCTAGCTTCAACTTCTGCTGAACGTTACACTGATACATATGCTTCCGTTATTGGTGAAAATGCACACCCTGGAAATAAACCCTTCTTTGATTTTTTAACATGTGGACTAGGCTCTCAAGTGAGTGAAGATAAGTGA 732 0.3866 MGMSNNSNGSTTGSRWNPTKEQISMLENLYEQGIRTPSEEQIKQITSSLKAYGHIEGKNVFYWFQNHKARQRQKQKQESIAYYNRYIHASQPNIFSSPQQYQNVMCQPYCLPKNEVTFYSQHPNLIGPGCISPRTEKFVPMAMSRFSNDQQIYEQFQFQQRNLGYYNVSNNNNHEETLTLFPLHPTGILESKSKERVSYLASTSAERYTDTYASVIGENAHPGNKPFFDFLTCGLGSQVSEDK* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0099 243 Gene3D - 15 82 - -
Lan10g0099 243 ProSiteProfiles 'Homeobox' domain profile. 9 74 IPR001356 GO:0003677
Lan10g0099 243 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 4 232 - -
Lan10g0099 243 CDD homeodomain 15 75 IPR001356 GO:0003677
Lan10g0099 243 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 4 232 IPR044555 GO:0003700|GO:0099402
Lan10g0099 243 Pfam Homeodomain 14 73 IPR001356 GO:0003677
Lan10g0099 243 SUPERFAMILY Homeodomain-like 6 82 IPR009057 -
Lan10g0099 243 SMART HOX_1 11 78 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0099 Lan-Chr10 578279 579720 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0099 3 234 Wox Gene Family AT5G59340 38.281 4.94e-45 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lan10g0099 Homeodomain 1.5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0099 - - pvu:PHAVU_011G064900g 233.032