Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0090 ATGGATCCAAATTTGGTTAGAAACCGTTCTGATTTCTACAATTCTGATCTAAATTATTGGGATCTTAATGGATTCAATTTCACCAATTCTGAACCCTTATATCAATTTGATGCTGCTGCTGCTGACCCATCAGATGATGCCAATATTGCAGTGTTTAACTCTCTACCGGATCCATCGCTTGAAGACTCCGAATTTTCAGAAACTGCTAGGTACATAAGCCAAATTCTAATGGAGGAGAACTTTGAAGAAAAGCCATGTATGTACTATGACCCATTGAGTCTGCAAATCACTGAGAAATCATTCTCTGATGCCCTTATAGCAAAATTGCCTCATTCTCCTGATCAACACCCCCATGACAGTCATCAAAATCTGGAGAGTCCAGATGAGAATTGTTCTCGAAGCACTAGTACTGCTAATTCTGGCAGCAGTGGCACCAATATTGGCCATGAGTCGAAGCATCCATCACCAGATACCCCTGTTTCTGATGGTTATACTTTCCGGTTAAATTCAGATTCTACCTCTCAACTTCCTCAGCATGCTTTGACTAATATTAGTAATGGAATGTTGGATTTGGATTCTTCTGTAACCAAGCTTTTGGCTCAAAATATCTTCAGCGGTGCAGACTCTATATTGCAGTTCAAAAGAGGATTAGAGGAAGCTAGTAAGTTTCTTCCTCAACGACCGCAGATTTTCACTGGTCTAGAGAGCAGCATGGGGTCTATAAATCCAAAGGGAGAAGGAGAGAAGGTGGCAAACAAGATAGAGAATGGTGTTAGGGAGAACTGGAATGGGCTGAAGAATAGGAAGAATCATGAGCGCGAAAGTGAAGGTCTTGAAGATGAAGAAGGAAGAAGCAACAAGCAATCCGCAGTTAGTTGTGTTGCAATTAGTAGTTTTGAAGAGAGTGAATTATCTGAAATGTTAGACCAAGTGTTGCTTAGTATTGAAAATGTGCCGCTGATTTCTGAACAGCAGCATGGATCAGTTATCGACAGCAACAGACAGCCAAATGAGAAACCACATTCATCAAATGAAGGGAAGACTCGTTCCAAGAAACAAAGCAGGAAGAAGGAAACTGTGGATTTGAGGACTCTCTTGATTCTCTGTGCTCAAGCTGTGTCCACCGGTGACAACAGGACTGCTAATGAACTATTAAAGCAGATCAGGCAGCATTCTTCTCATTTAGGTGATGCTTCACAGAGGCTGGCTCATTACTTCGCCAATGGCCTAGAGGCACGCTTGATTGGTGCTGGAACTGGAACCCAAATATTTGTTAACTCTAGTAGCTACAAGAACTTTACTGCTGCTGATTTTATAAAAGCTTACCAACTTACAATATCTGTTTGCCCTTTCAAGAAAGTTTCACATTTCTTTGCTAACAAAATGATTATGAAAGCAGCTGAAAATGCAGAAACCCTACATATTATTGATTTCGGTATCCTGTATGGTTTCCAATGGCCAATACTTATCAAGTTTCTGTCAGAAAGAAGTGGTGGGCCTCCGAAACTACGGATCACGGGGATAGAGTATCCCCAACCCGGCTTTCGTCCATCAGAAAGACTCGAGGAAACAGGCCATCGTCTAGCTAACTACTGTAAGCGTTTCAATGTTCCCTTTGAGTTCAAAGCCATAACATCACGAAACTGGGAAACCATTCAAATTGGCGATCTTAAAATCAGGAGCAATGAGGTACTTGCTGTGAACTGTCTGATAAGGTTTAGGAATTTACTCGATGAAACAATTGAAGTGAATAGTCCTAGAAATGCAGTTCTGGATTTAATCAGGAAGATGAGTCCGGATATTTTTGTTCAATCCATAATAAATGGATCATACAATTCTCCTTTCTTTGCCACACGCTTTAGAGAGGCACTGTTCCATTTTTCTGCAGTTTATGATATGTATGATAATGTCATATCCCGTAAAAATGAATGGAGATTGATGATTGAGAGAGAGATTCCGGGTAGGGAGATTATGAATGTTGTAGCCTGTGAAGGTTTTGAGAGGGTTGAGAGGCCCGAGACATACAAACAATGGCAGGTTAGGAATACAAGGGCTGGTTTTAAGCAGATCCCTCTTGATAAGGAGCTAATGACCAAATTTAAGGGGAAAATAAGAAAATGGTACCAACATGACAAAGATTTTGTCTTTGATGAAGACAACAATTGGATGCTTCAAGGCTGGAAGGGTCGTATCTTGTATGCTTCCACTGCTTGGGTAACAGCATAA 2226 0.4088 MDPNLVRNRSDFYNSDLNYWDLNGFNFTNSEPLYQFDAAAADPSDDANIAVFNSLPDPSLEDSEFSETARYISQILMEENFEEKPCMYYDPLSLQITEKSFSDALIAKLPHSPDQHPHDSHQNLESPDENCSRSTSTANSGSSGTNIGHESKHPSPDTPVSDGYTFRLNSDSTSQLPQHALTNISNGMLDLDSSVTKLLAQNIFSGADSILQFKRGLEEASKFLPQRPQIFTGLESSMGSINPKGEGEKVANKIENGVRENWNGLKNRKNHERESEGLEDEEGRSNKQSAVSCVAISSFEESELSEMLDQVLLSIENVPLISEQQHGSVIDSNRQPNEKPHSSNEGKTRSKKQSRKKETVDLRTLLILCAQAVSTGDNRTANELLKQIRQHSSHLGDASQRLAHYFANGLEARLIGAGTGTQIFVNSSSYKNFTAADFIKAYQLTISVCPFKKVSHFFANKMIMKAAENAETLHIIDFGILYGFQWPILIKFLSERSGGPPKLRITGIEYPQPGFRPSERLEETGHRLANYCKRFNVPFEFKAITSRNWETIQIGDLKIRSNEVLAVNCLIRFRNLLDETIEVNSPRNAVLDLIRKMSPDIFVQSIINGSYNSPFFATRFREALFHFSAVYDMYDNVISRKNEWRLMIEREIPGREIMNVVACEGFERVERPETYKQWQVRNTRAGFKQIPLDKELMTKFKGKIRKWYQHDKDFVFDEDNNWMLQGWKGRILYASTAWVTA* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0090 741 MobiDBLite consensus disorder prediction 262 286 - -
Lan10g0090 741 MobiDBLite consensus disorder prediction 109 171 - -
Lan10g0090 741 Pfam GRAS domain family 362 738 IPR005202 -
Lan10g0090 741 PANTHER SCARECROW-LIKE PROTEIN 34 38 740 - -
Lan10g0090 741 MobiDBLite consensus disorder prediction 338 357 - -
Lan10g0090 741 MobiDBLite consensus disorder prediction 127 152 - -
Lan10g0090 741 MobiDBLite consensus disorder prediction 112 126 - -
Lan10g0090 741 MobiDBLite consensus disorder prediction 261 290 - -
Lan10g0090 741 MobiDBLite consensus disorder prediction 327 357 - -
Lan10g0090 741 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 38 740 IPR005202 -
Lan10g0090 741 ProSiteProfiles GRAS family profile. 353 739 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0090 Lan-Chr10 532829 535951 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0090 70 739 GRAS Transcription Factor Family AT1G07530 50.708 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan10g0090 GRAS 3.2e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0090 - - adu:107461599 915.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0090 10 532829 535951 Lan3g0052 3 350567 353108 LSH
Lan10g0090 10 532829 535951 Lan13g0320 13 2103452 2106323 PCT
Lan13g0319 13 2098090 2100837 Lan10g0090 10 532829 535951 PCT