Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0089 ATGTTTTCTGCAAATTCCCTTTTGGAAAATATTCCTGCTCAGTTGAAAGAATTCTTAGTTGAAGAAGATTCAACCTCTCCTTCTTCTGTGACAAGCTCAGTTGAAGAATACACAAAATATTCCAATCCCATACTAAGATACATAAATGACATTCTCATGGGTGAGGAAGATAACTTGGAGAACAAACCCTGCATGTTGCAGGAATGTTTGAGACTCCAAGCTGCTGAAAAATCATTCTATGATGTGCTTGGACATAACTATCCTTCATCACACAACCAAATCCGTGGCTTTTTCAATGATGATGATGATGGTAACAATGGTTGCAGTGTTAGTTTTGAGAGCAATAGTACTAGCTACATCACTGATAACTCATATGAGTCTGAAAGGATCAACACTGCTGATGAATTTGAATCTTATTTGCTTGATAATCCTTTAGTTGATACCTCAGAAAACACCAATGATGTAGATGTAGCTCCTGATCCATCACAAGCTGCTAAGAGGAATGCGATTCGGCCGCAGAACAAGGCGGTTTTGATCGGAGAGAATGCTGTGCAAAGGGTAAAGAGAAGCCATCAGGTGGATGGTAATTCACATGAAGAAAATGAAAGAGGAAGCAAGATATCAGCGGTTTTTTCTGACAATTCAGAGCCACTAGAGCTCTTGGATGAGGTGCTGCGAGTTCAGATTGGAGGAAGGCATTCTTGTACTGCAGGTGAAACATCATCAGAAAATGAGACATTCAAGCCGAATGTCGTTGATTCGGGAGGAGGATCGATCGGAAAGGCGGCGACACGTTCGAAGAAAGGGACTAATACGGAGACAACAACAGGGGTAGATTTATGGACTCTGCTAACTCAATGTGCACAAGCTGTTGCAAGCTATGATCAAAGAAATGCAAATGAGCTATTAAATCAGATAAGGCAACACTCTTCCCCATTTGGTGATGGACTACAGCGGTTATCTCATTACTTTGCCATTGGCCTTGAGACACGGTTGGCCGCCGGAACGCCGTCGTATACGCCTTTTGATATGGTAACTGCTGCAGATATGTTGAAAGCTTATAAGCTACAAGTCCAAGTGTTTCCTTTGCAGAGAATGTCAAATTTATTGACAACAAGAAAAATTGTGGACCTAGTCAAGAATGAAGGCACCCTTCACATTATTGATTTCGGCATTTCCTATGGTTTCCAGTGGCCTTGCCTCATCAAACATCTGTCGCAACGACGCGGCGGATCGCCGAAGGTTCGTATGACCGGAATTGATTTTCCTCAGCCCGGATTTCGCCCTGCTGAAAGGCTTCAAGAGACGGGGCAGCGCCTTGAGAATTACTGCAAGAGGCACAATGTTCCATTTGAGTACAATTGCATAGCACAAAAATGGGAAACTATAAGACTTGAAGATCTCAAAATAGATAAGACTGAGGTAACTGTTGTTAACTGTTTGTACAGGATGAAGAATCTGCCTGATGAAACTGTTTCAGTGAACTCTGCTAGAGATGCTTTGTTGAAGTTGTTCAGGAAGATTAATCCAAACATCTTCATCCATGGGGTAGTGAATGGAACATATAGTGCACCATTTTTCCTAACAAGGTTCAGGGAGACACTTTTCCACTTTTCATCACTGTTTGATATGTTTGAGGCTAATGTGGATCGTGAAGATACCGAAAGGGTGATACTTGAGAAAGGATTGTTTGGAAGGGATGCTATCAATGTCATAGCTTGTGAGGGGGCAGAAAGGGTTGAAAGGCCAGAAACATATAAGCAATGGCAGGTTAGGAACCTGAGAGCAGGGTTTAAGCAACTTAGATTGGATCCAGAATTGGTGAATGAAGCTAAAGAAATGGTGAAGAGTGAATATCATAAAGATTTTGTAGTGGATGAGAATGGAAAATGGGTTTTGCTGGGATGGAAAGGGCGTATTCTTAATGCTGTTTCTGCTTGGATTCCTGCTTAA 1953 0.4188 MFSANSLLENIPAQLKEFLVEEDSTSPSSVTSSVEEYTKYSNPILRYINDILMGEEDNLENKPCMLQECLRLQAAEKSFYDVLGHNYPSSHNQIRGFFNDDDDGNNGCSVSFESNSTSYITDNSYESERINTADEFESYLLDNPLVDTSENTNDVDVAPDPSQAAKRNAIRPQNKAVLIGENAVQRVKRSHQVDGNSHEENERGSKISAVFSDNSEPLELLDEVLRVQIGGRHSCTAGETSSENETFKPNVVDSGGGSIGKAATRSKKGTNTETTTGVDLWTLLTQCAQAVASYDQRNANELLNQIRQHSSPFGDGLQRLSHYFAIGLETRLAAGTPSYTPFDMVTAADMLKAYKLQVQVFPLQRMSNLLTTRKIVDLVKNEGTLHIIDFGISYGFQWPCLIKHLSQRRGGSPKVRMTGIDFPQPGFRPAERLQETGQRLENYCKRHNVPFEYNCIAQKWETIRLEDLKIDKTEVTVVNCLYRMKNLPDETVSVNSARDALLKLFRKINPNIFIHGVVNGTYSAPFFLTRFRETLFHFSSLFDMFEANVDREDTERVILEKGLFGRDAINVIACEGAERVERPETYKQWQVRNLRAGFKQLRLDPELVNEAKEMVKSEYHKDFVVDENGKWVLLGWKGRILNAVSAWIPA* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0089 650 MobiDBLite consensus disorder prediction 235 272 - -
Lan10g0089 650 MobiDBLite consensus disorder prediction 235 251 - -
Lan10g0089 650 Pfam GRAS domain family 282 647 IPR005202 -
Lan10g0089 650 ProSiteProfiles GRAS family profile. 271 648 IPR005202 -
Lan10g0089 650 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 14 649 IPR005202 -
Lan10g0089 650 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 14 649 - -
Lan10g0089 650 MobiDBLite consensus disorder prediction 150 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0089 Lan-Chr10 527420 529616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0089 40 649 GRAS Transcription Factor Family AT2G29060 43.790 1.35e-171 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan10g0089 GRAS 2.7e-108 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0089 - - aprc:113855970 858.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1984 6 30718938 30722191 Lan10g0089 10 527420 529616 LSH
Lan10g0089 10 527420 529616 Lan13g0319 13 2098090 2100837 PCT