Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0086 ATGATGAATAAGATGAGCAACAACATGAGTTCTGTGAGTAGCTCTGATCTGATAGATGCAAAGCTTGAAGAGCATCAGTTATGTGGATCCAAGCAGTGCCCTGGTTGCGGACACAATTTTGAATCAAAACAGGATTGGGTAGGCCTACCAGCTGGAGTGAAGTTTGATCCAACAGATCAAGAACTAATAGAACACCTTGAGGCCAAAGTGGAGTCCAAGAATATGAAATCACACCCTTTGATAGATGAATTCATTCCTACTATTGAAGGAGAAGATGGTATTTGTTATACCCATCCAGAGAAACTTCCAGGAGTAACAAGAGATGGATTGAGCAGACACTTTTTCCACAGACCTTCAAAGGCATATACAACTGGGACAAGAAAGAGAAGAAAGATACAAAACGAGTGTGATTTGCAAGGTGGAGAAACAAGGTGGCATAAAACAGGTAAGACTAGGCCAGTGATGGTGAATGGAAAACAAAAAGGGTGTAAGAAAATTCTAGTCTTGTACACCAATTTTGGAAAAAACAGAAAACCTGAGAAGACAAATTGGGTGATGCACCAATACCATCTTGGCCAGAATGAAGAAGAGAAAGAAGGGGAGCTTGTAGTGTCAAAGATATTCTACCAAACACAGCCAAGACAATGTAATTGGTCTGATAAAAGTGCAACAACAACTGGTGAAGGAAGTGGTGAAGTACATAATAAGAATAATATTGGTAGAAGGGACAGTGGAAGTGGAAGTTGTTCTTCTTCAAGGGACATAGTGACTCATAGAGATGAGATGTCTGCTATTGTTAGTGTCCCTCTTCCAATTACAACTTTCACTCATGCCTTGGATATTCAACATCTTAAATCTGATCATTACAGCTTCATGCCATTCAGGAAAAGCTTTGATGAGGTTGGCATAGGAGAAGCATCTACACCAAGAGAAGTGCAAGCATCAAGATCATGTGAAGAAATACATGAACATCAACGACACCAACTTATAGCTCATAATCATCACAATCAGCAGCAGCAGCAACAACATCATCAACATGTGCACCATCAAATTGCAACATCAGCTTTCCATATCAACACACCTTCACATCCAATCTCTACACTTATTTCTCCTCCACTGCACCACACATCCATCATCCTCGACAACAACTCTTACCATGTCTCTAGAATAATGCTCCAACAAAATGAAAATTTCCAGCAACAACATCATAAACTAGGAGCAAGGTCTGAGTCGAGTTTGGAGGAACTCATCATGGGGTGCACTTCAACTGATATAAAAGAGATTCCCTTGCAGGAATCATCCATCACAATCCAACAAGAGGCTGAATGGTTGAAGTACTCTTCTTACTGGCCAGACCATGATAACCCGGATCATCAATCATGA 1383 0.4056 MMNKMSNNMSSVSSSDLIDAKLEEHQLCGSKQCPGCGHNFESKQDWVGLPAGVKFDPTDQELIEHLEAKVESKNMKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQNECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQNEEEKEGELVVSKIFYQTQPRQCNWSDKSATTTGEGSGEVHNKNNIGRRDSGSGSCSSSRDIVTHRDEMSAIVSVPLPITTFTHALDIQHLKSDHYSFMPFRKSFDEVGIGEASTPREVQASRSCEEIHEHQRHQLIAHNHHNQQQQQQHHQHVHHQIATSAFHINTPSHPISTLISPPLHHTSIILDNNSYHVSRIMLQQNENFQQQHHKLGARSESSLEELIMGCTSTDIKEIPLQESSITIQQEAEWLKYSSYWPDHDNPDHQS* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0086 460 SUPERFAMILY NAC domain 43 210 IPR036093 GO:0003677|GO:0006355
Lan10g0086 460 Gene3D NAC domain 58 214 IPR036093 GO:0003677|GO:0006355
Lan10g0086 460 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 6 437 IPR044799 GO:0003700
Lan10g0086 460 ProSiteProfiles NAC domain profile. 49 210 IPR003441 GO:0003677|GO:0006355
Lan10g0086 460 PANTHER NAC DOMAIN-CONTAINING PROTEIN 75 6 437 - -
Lan10g0086 460 MobiDBLite consensus disorder prediction 218 254 - -
Lan10g0086 460 MobiDBLite consensus disorder prediction 218 233 - -
Lan10g0086 460 Pfam No apical meristem (NAM) protein 50 191 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0086 Lan-Chr10 502011 507153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0086 13 457 NAC Transcription Factor Family AT5G56620 52.000 2.38e-136 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan10g0086 NAM 2.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0086 - - gmx:100791884 726.857