Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0076 ATGGGTCGCCGTAAGAACAACAATAATCAGAGTTCCAACAAAGACATGAACAATAACAGCAACAATCTTCGATTTCAAGATGCTGATGAAGTCATCGAAGATGTAGCTGAAAGCTCCAACCTTGACCATTCAATGTGTGACCCTGTTGCTGATGCTGAAGTTCAACCTTCTTCTCTCGACGTTCTTTCTGATGATAAAACCAGCGCTGATTACTACTTCGATTCATACTCTCATTTTGGAATTCACGAAGAAATGTTGAAGGACAGTGTGAGAACTAAGACATATCAAAGTGTTATTTATCAGAACAAGTTCTTGTTTAAGGATAAAGTTGTTCTTGATGTGGGTGCTGGCACTGGGATTTTATCACTATTCTGTGCCAAAGCAGGGGCCAAACATGTCTATGCAGTTGAGTGCTCCCATATGGCTGACATGGCAAAGGAGATAGTTGAAGTGAATGGATACTCTAATGTTGTAACAGTTTTAAAGGGGAAGATTGAAGAACTTGAACTTCCGGTTGCGAAAGTTGATATTATAATTTCAGAATGGATGGGTTATTTCTTGTTGTTTGAGAATATGTTAAATACTGTTCTCTATGCTCGTGACAAATGGCTTGTGGATGGTGGAGTTGTGCTACCAGATAAAGCATCCCTCTATCTCACTGCCATCGAAGATGCAGACTACAAAGAAGATAAAATTGAGTTTTGGAACAATGTATATGGATTTGACATGAGCTGCATCAAGAAGCAAGCCATAGTGGAGCCTCTTGTTGACACAGTTGACCAGAAACAGATTGTTACAAACAGCCAGCTTCTTAAGACTATGGATATCTCAAAGATGGCTCCTGGAGATGCTTCGTTCACAGCACCCTTTAAACTTGTAGCTGCACGTGATGATTATATTCATGCTCTTGTTGCTTATTTTGATGTATCCTTTACAAGGTGTCATAAACTGATGGGCTTCTCCACAGGGCCAAGATCTCGAACTACACATTGGAAACAAACAGTCCTTTATCTAGAAGATGTGTTGACTGTTTGTGAAGGGGAGGCAATTGTTGGGAGCATGACTGTGGCACAAAATAAAAAGAATCCTAGAGATGTTGACATAGCACTCAAGTATACATTAAATGGCAGAAGATGCAATGCTTCAAGGGTTCAGCATTACAAGATGCGATAA 1173 0.3998 MGRRKNNNNQSSNKDMNNNSNNLRFQDADEVIEDVAESSNLDHSMCDPVADAEVQPSSLDVLSDDKTSADYYFDSYSHFGIHEEMLKDSVRTKTYQSVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAKHVYAVECSHMADMAKEIVEVNGYSNVVTVLKGKIEELELPVAKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDGGVVLPDKASLYLTAIEDADYKEDKIEFWNNVYGFDMSCIKKQAIVEPLVDTVDQKQIVTNSQLLKTMDISKMAPGDASFTAPFKLVAARDDYIHALVAYFDVSFTRCHKLMGFSTGPRSRTTHWKQTVLYLEDVLTVCEGEAIVGSMTVAQNKKNPRDVDIALKYTLNGRRCNASRVQHYKMR* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0076 390 Gene3D Vaccinia Virus protein VP39 60 212 IPR029063 -
Lan10g0076 390 Pfam Ribosomal protein L11 methyltransferase (PrmA) 103 181 - -
Lan10g0076 390 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 34 390 IPR025799 GO:0016274|GO:0018216
Lan10g0076 390 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 75 389 IPR029063 -
Lan10g0076 390 Gene3D - 214 390 - -
Lan10g0076 390 CDD AdoMet_MTases 111 211 - -
Lan10g0076 390 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 69 371 IPR025799 GO:0016274|GO:0018216
Lan10g0076 390 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 1.2-RELATED 34 390 - -
Lan10g0076 390 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0076 Lan-Chr10 435695 438717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0076 72 353 C2H2 Transcription Factor Family AT3G12270 40.789 1.43e-67 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0076 K11434 - gmx:100781777 658.677