Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0073 ATGGGAAGAAAGTGTTCACATTGTGGAAACATTGGTCATAATTCTAGGACATGCACTTCTTTTAGAGGGACATTTGTAGGACTACGTCTCTTTGGTGTTCAACTAGATATATCATCTTCTTCATCATCTTGTATGAAGAAAAGCTTTAGCATGGATTCCTTCTTACCCATATCATCATCTTCTAGCTCCTTTGCTTCATCAAGATTAATCATTGATGAAAACACTGATAGAACCTCTATTGGGTATCTATCAGATGGTCTCATAGTTCGACCACAAGAGAGGAAGAAAGGAGTTCCATGGACAGAAGAAGAGCACCGAATATTCCTTGTTGGACTTGAGAAGCTAGGTAAAGGTGATTGGAGGGGTATCTCAAGAAACTATGTCACTACAAGAACCCCAACCCAAGTTGCTAGCCATGCTCAAAAGTACTTTCTCAGACTTGCAACCATTAATAAGAAGAAGCGACGTTCAAGTCTCTTTGACTTGGTGGGTAGCGGTAAGACAAACAAAGCAGCTCCTATTAGCTTCACCAATAATAGCAACTTGGGTGACTCAGTTTGTACTAATCAACTTGTGAAATCCAAATGTGGTGGAGTTGTGAATGATGCTACTTTGTCTCTGCTAGGGAGCCTTAAATCTTTTCAACAACAAACCAAATCAAATGAACAAAAAACTAGTGATAATTGCTCTCATTTTCAAGCAGAACATAATGAAGCTGTGCAAATCAGGCTTATGAAATCTTCAAATGTGACTCTGCCAATTGCAACACCTGATCTAGAACTCACTCTTGCAGCCCCAAAGGCTAAGACCATAGAGCAGAATAAATCATCTTCGGTTTCTTTCCTTCCTGGGCCAATTAGTGTGACTTAA 870 0.3966 MGRKCSHCGNIGHNSRTCTSFRGTFVGLRLFGVQLDISSSSSSCMKKSFSMDSFLPISSSSSSFASSRLIIDENTDRTSIGYLSDGLIVRPQERKKGVPWTEEEHRIFLVGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKYFLRLATINKKKRRSSLFDLVGSGKTNKAAPISFTNNSNLGDSVCTNQLVKSKCGGVVNDATLSLLGSLKSFQQQTKSNEQKTSDNCSHFQAEHNEAVQIRLMKSSNVTLPIATPDLELTLAAPKAKTIEQNKSSSVSFLPGPISVT* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0073 289 ProSiteProfiles Myb-like domain profile. 92 144 IPR001005 -
Lan10g0073 289 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 95 146 IPR006447 GO:0003677
Lan10g0073 289 PANTHER TRANSCRIPTION FACTOR MYB1R1-LIKE ISOFORM X1 1 282 - -
Lan10g0073 289 Gene3D - 98 151 - -
Lan10g0073 289 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 92 148 IPR017930 -
Lan10g0073 289 PANTHER TRANSCRIPTION FACTOR KUA1 1 282 - -
Lan10g0073 289 SUPERFAMILY Homeodomain-like 93 148 IPR009057 -
Lan10g0073 289 CDD SANT 99 144 IPR001005 -
Lan10g0073 289 SMART sant 96 146 IPR001005 -
Lan10g0073 289 ProSiteProfiles Zinc finger CCHC-type profile. 3 20 IPR001878 GO:0003676|GO:0008270
Lan10g0073 289 ProSiteProfiles SANT domain profile. 100 148 IPR017884 -
Lan10g0073 289 Pfam Myb-like DNA-binding domain 99 144 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0073 Lan-Chr10 418631 420385 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan10g0073 Myb_DNA-binding 1.7e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0073 - - gmx:778052 318.546