Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0059 ATGTCTTTTCGTGGTGATGAAAGCATAATGCTACCCGTTAACATCACCATGGTGGCTGTTGATAGCGACAAAAACAGTGGTTATGCCTTCCATTGGGCAACTCATCACATTGAAAATTCTATCATCATTGCGGTTCATGTCAAGCACAAAAACATTCCTCATCAGGGGACGAATGTTTGTCGACCTGACGAAGACGATGAAGCTAATGTTTTCAGTCAGATACGTCCATTGTGTAATCCTAATATCGTTAAATTGAAAGAAGCTGTAGTTGATGATAGTGACATTACCAGAGGAATTTTAGAATTTGCACAGAGGAATCACATCCATTGTATCGTGGTTGGTGCACCCTCAACCAAGAACAAGAACTCTTTGACAAGTGTTGGAAAACTAACAGCAAGGTCTTTTACCTTAAGGACTGGAACCAAAAAACATAAAGAACACCAAAATCCTCAAAAGGTGGCAGAAGCAATAATCAAGGAAGCCCCCGATTATATTTCAGTGTATGTGATTTCGAAAAGGAAGTTAGTGGCAGTTCGACCCGCAACAAGTCCATTGGTAAACGTGGTCGCACCACCTGTGCAGCCACTTCAACCTAATGATTATGAGTCCGAAAATGGAGTAAGGTGTCAAGAACTGAATAATCTTATTGCCTACTTTCCAATAATCATGTTAAACTACAATTCAAACATGACACAAACGCCGAGAGTACGGAGCACTAGAGAAAGAACAGAGAGAAAACATGCACGTGAGAGACCAAGGATTTCAACAAGCACTCAATCAATGGGCAGCTTTGATCTAACCATTAATAGAGAACAAAGGTTATCATCATCCTCAGATGAAAATAACTCTTCAGGGTCACTTAAGTACGGATCAACGGATGTGATTAAGCACGATATGGATTTAAGCATTGCATCAGATTCTCAATCATCAGGAGATGTAGAAGTTGAAATGAAAAAATTGAGGCTCAAACTGAAGCAAACTATGGATATGTATAGCTCAGCTTGCAAAGATGCAATATCAGCCCAAAATAAGGCTGAAGAGATTAACCTTTGGAAAATGGAGAGGAGACAAAGGTTTAAGGATGTAAGGTTGTCTGAAGAGACAGCTCTTGCAATGGCAGAAAAGGAGAAGGCTAAAGTCAAAGCTGCATTGGAAGCAGCCGAGAAAGCCATGAAGATGGCAGAAAAGGAAGCACGTAGAAGATTGCAGGCAGAAAAGATGGCAAAGAGGGACGCAAAAGAGAAGGACTGGGCATTAACCGCGTTAGCTAGCAAAGAGTTTCGATGCAGAGAATACACCATAGAGGATATTGAAAAAGCTACTGAAAAGTTCTCCCCATCATTGAAAATAGGTGAAGGTGGATATGGACCTGTGTTTAAAGGCCAACTTGATCACACTTCAGTTGCAATCAAACTTTTAAACCCTGAGGCTTCACAGGGCAGGAAGCAGTTCCAACAAGAGGTTGAGGTATTAAGCACCATTAGGCATCCTAACATGGTTCTCCTCCTTGGTGCCTGTCCTGAGTATGGATGCTTGGTGTATGAATACATGAATAAGGGTAGCTTAGAAGATAGATTATTGATGAAAAACAACAGCCCTCCTATTCCATGGCCGAAACGTTTCGAAATCGCTTCTGAGATTGCAACTGCTCTCCTTTTCCTTCACCAAACAAAGCCAGAACCCCTTGTTCATAGAGACCTTAAACCAGCTAACATTCTTTTGGACAGAAATTTTGTGAGTAAAATAAGTGATGTCGGTCTTGCAAGACTAGTCCCTCCTTCTGTCGCGGATTCTGTCACACAATATTACATGACTGCAGCTGCTGGAACCTTTTGCTACATTGATCCTGAGTATCAACAAACAGGAAAGTTAACAACAAAGTCAGATATATATTCCTTTGGGATAGTGTTGCTGCAGATAATCACTGCTAAGCCTCCAATGGGGATTGCTCACCATGTTAAAAGGGCAATTGACAACGGAAGTTTTTCTGATATGCTTGATCCTGTGGTGACTGATTGGCCAGTCGAAGAGGCTCTAGCATTTGCTAAATTGGCATTGAAATGTGCAGAACTTAGCAAGAAGGATAGGCCAAATCTTGCATTAGTAGTGGTACCAGAGCTCAATCGTTTAAGAGACTTTGGATATACGTCACAGAATAATCAGATTAAGAATCGTAGCCATTCACCACGTCCCCCGACACCAAGAAGGAATTCACACTCAATAACATGA 2229 0.4136 MSFRGDESIMLPVNITMVAVDSDKNSGYAFHWATHHIENSIIIAVHVKHKNIPHQGTNVCRPDEDDEANVFSQIRPLCNPNIVKLKEAVVDDSDITRGILEFAQRNHIHCIVVGAPSTKNKNSLTSVGKLTARSFTLRTGTKKHKEHQNPQKVAEAIIKEAPDYISVYVISKRKLVAVRPATSPLVNVVAPPVQPLQPNDYESENGVRCQELNNLIAYFPIIMLNYNSNMTQTPRVRSTRERTERKHARERPRISTSTQSMGSFDLTINREQRLSSSSDENNSSGSLKYGSTDVIKHDMDLSIASDSQSSGDVEVEMKKLRLKLKQTMDMYSSACKDAISAQNKAEEINLWKMERRQRFKDVRLSEETALAMAEKEKAKVKAALEAAEKAMKMAEKEARRRLQAEKMAKRDAKEKDWALTALASKEFRCREYTIEDIEKATEKFSPSLKIGEGGYGPVFKGQLDHTSVAIKLLNPEASQGRKQFQQEVEVLSTIRHPNMVLLLGACPEYGCLVYEYMNKGSLEDRLLMKNNSPPIPWPKRFEIASEIATALLFLHQTKPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPPSVADSVTQYYMTAAAGTFCYIDPEYQQTGKLTTKSDIYSFGIVLLQIITAKPPMGIAHHVKRAIDNGSFSDMLDPVVTDWPVEEALAFAKLALKCAELSKKDRPNLALVVVPELNRLRDFGYTSQNNQIKNRSHSPRPPTPRRNSHSIT* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0059 742 Gene3D Phosphorylase Kinase; domain 1 418 516 - -
Lan10g0059 742 SUPERFAMILY Protein kinase-like (PK-like) 426 702 IPR011009 -
Lan10g0059 742 Coils Coil 370 415 - -
Lan10g0059 742 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 9 734 - -
Lan10g0059 742 Gene3D HUPs 16 137 IPR014729 -
Lan10g0059 742 CDD STKc_IRAK 450 710 - -
Lan10g0059 742 PANTHER OS02G0152300 PROTEIN 9 734 - -
Lan10g0059 742 SMART serkin_6 444 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0059 742 Pfam Protein tyrosine and serine/threonine kinase 449 700 IPR001245 GO:0004672|GO:0006468
Lan10g0059 742 ProSitePatterns Serine/Threonine protein kinases active-site signature. 562 574 IPR008271 GO:0004672|GO:0006468
Lan10g0059 742 Gene3D Transferase(Phosphotransferase) domain 1 517 728 - -
Lan10g0059 742 MobiDBLite consensus disorder prediction 237 253 - -
Lan10g0059 742 MobiDBLite consensus disorder prediction 232 267 - -
Lan10g0059 742 ProSiteProfiles Protein kinase domain profile. 444 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0059 742 MobiDBLite consensus disorder prediction 715 742 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0059 Lan-Chr10 332285 336977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0059 85 714 Receptor kinase-like Gene Family AT5G12000 55.124 0.0 658
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lan10g0059 PK_Tyr_Ser-Thr 4.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0059 - - gmx:100786386 811.216