Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0058 ATGTCGACGGTGTACGTTCTAGAACCGCCGACGAAGGGGAAGGTGGTTTTGAAGACAACGCGAGGTCCAATTGACATTGAACTTTGGCCAAAGGAAGCTCCGAAAGCAGTTAGAAACTTCATTCAGCTTTGCGTTGATGGCTATTATGACAATTCCATCTTCCATCGTATTATCAAAGATTTCCTCATTCAAGCTGGTGATCCTACCTCCACCGGCACTGGAGGTGAAAGTATTTATGGAGGAGTTTTTTCTGATGAGTTTCATTCACGTCTAAAATTCAAGCACAGAGGTATAGTTGCAATGGCCAATGCTGGCTCGCCTAATTCAAATGGAAGTCAGTTTTTCATTACTCTTGACCGTTGTGACTGGCTTGATCGGAAGCATACCATTTTTGGAAAGGTGACAGGAGATACAATGTATAATCTTTTGAGAGTGGGAGAAGTTGAAACTGATAAGAATGACCGGCCTTTAGATCCCGCCCCAAAGATTTTATCAGTTGAGGTATTATGGAACCCATTTGAAGATATTGTTCCAAGAACACTTCAGAAGCCTGAAACTAAAGCTACATCTGATACAGACAATAAAGATTCAAAAAAGAAAGGCATAAAAAAATTGAACTTGCTTTCATTTGGAGAAGAAGCAGAAGTTGAGGAAAAGGAACTAGCATTGGTGAAGCAAAAAATTAAGAGCAGTCATGATGTCTTGAACGATCCTCGTCTTCTCAGGGAAGAAACTGCTAATAATGAATCGAGTTCATCCGCTAGTAAATTAACAAGGAACATGCAGTTATCTGTAAGGGATGCGCTAAACTCAAAGAAAGAAGAGTCTCAAAAAGATTCAGAAGGTGGTAATTTCGCCCGTCTCGATTCCGGTGATGATGAAGATGAAGAAGCAGATTTTGATTCAAGAATGCGCTTGCAAATACTCCAAAAGCGGAAGGAGCTGGGCGATCTCCCTCCAAAGTCAAAGTCGCAAAATGGAAGGTCAAATCTGAAGGACCATGATATGTCGGCAGCCAGGTCCAATGCTAGTGTTGATGAAGATCAACCAAGGGTGGATAGGTTGTCCTTAAGAAAAAAGGGTATAGGATCTGAAGCAAGAGCCGAGCGAATGGCTAATGCAGATGTAGATATGCAGCTATTGAGTGAAGCTGAGAAAGGAAGGCAGTTGCAGAAGCAGAAGAAACGCAGACTTCAGGGGCGTGAAGATGAAGTTCTTGCTAAACTTGAGAAATTTAAGAATGCTTTATCAGCAAAGACGACATCCACAACTGGTGAATCTGGAGATGGCAAGGAAGAGGAGTTGTCTGACTGGAAAGTTGTTGACTTAAAATTTGCCCCCCAGGATGGCAAGGACCACATGTCTCGTAAGGAAGACCCGAATGACTATGTGGTGCATGATCCTCTATTGGAGAAAGGGAAAGAGAAGTTCAATAAGATGCAGGCGAAACAAAAGAGACGAGAGCGAGAGTGGGCTGGGAGATCCCTTACTTGA 1494 0.427 MSTVYVLEPPTKGKVVLKTTRGPIDIELWPKEAPKAVRNFIQLCVDGYYDNSIFHRIIKDFLIQAGDPTSTGTGGESIYGGVFSDEFHSRLKFKHRGIVAMANAGSPNSNGSQFFITLDRCDWLDRKHTIFGKVTGDTMYNLLRVGEVETDKNDRPLDPAPKILSVEVLWNPFEDIVPRTLQKPETKATSDTDNKDSKKKGIKKLNLLSFGEEAEVEEKELALVKQKIKSSHDVLNDPRLLREETANNESSSSASKLTRNMQLSVRDALNSKKEESQKDSEGGNFARLDSGDDEDEEADFDSRMRLQILQKRKELGDLPPKSKSQNGRSNLKDHDMSAARSNASVDEDQPRVDRLSLRKKGIGSEARAERMANADVDMQLLSEAEKGRQLQKQKKRRLQGREDEVLAKLEKFKNALSAKTTSTTGESGDGKEEELSDWKVVDLKFAPQDGKDHMSRKEDPNDYVVHDPLLEKGKEKFNKMQAKQKRREREWAGRSLT* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0058 497 CDD cyclophilin_CeCYP16-like 8 180 - -
Lan10g0058 497 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 49 66 IPR020892 GO:0003755|GO:0006457
Lan10g0058 497 PANTHER SPLICEOSOME-ASSOCIATED PROTEIN CWC27 HOMOLOG 5 203 - -
Lan10g0058 497 MobiDBLite consensus disorder prediction 472 497 - -
Lan10g0058 497 MobiDBLite consensus disorder prediction 300 319 - -
Lan10g0058 497 MobiDBLite consensus disorder prediction 327 370 - -
Lan10g0058 497 SUPERFAMILY Cyclophilin-like 14 185 IPR029000 -
Lan10g0058 497 MobiDBLite consensus disorder prediction 245 267 - -
Lan10g0058 497 Gene3D - 2 183 IPR029000 -
Lan10g0058 497 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 22 159 IPR002130 GO:0000413|GO:0003755
Lan10g0058 497 MobiDBLite consensus disorder prediction 268 289 - -
Lan10g0058 497 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 28 43 IPR002130 GO:0000413|GO:0003755
Lan10g0058 497 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 54 66 IPR002130 GO:0000413|GO:0003755
Lan10g0058 497 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 113 IPR002130 GO:0000413|GO:0003755
Lan10g0058 497 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 IPR002130 GO:0000413|GO:0003755
Lan10g0058 497 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 IPR002130 GO:0000413|GO:0003755
Lan10g0058 497 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 15 168 IPR002130 GO:0000413|GO:0003755
Lan10g0058 497 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 5 203 IPR044666 -
Lan10g0058 497 MobiDBLite consensus disorder prediction 239 370 - -
Lan10g0058 497 MobiDBLite consensus disorder prediction 417 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0058 Lan-Chr10 326875 331372 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0058 9 173 U-box Gene Family AT5G67530 47.879 2.04e-41 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0058 K12737 - gmx:100793148 765.763