Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0057 ATGGAGGAATTGTCATTCGCGGTTGCAGTGCCATTAAGAGTAGGTAATTCGGTCTGTGATAAAAATCCAATCATAGCTACGACCCACATGGATGCATCGAGGTTTAAGCTAATGGGAGATGCAGGTTTGTTATCTAATTCTGTAACTAAGTTAGAGACGGTTGCAAGTTCTGAGAGTGGCCATAATGAAGTTAGTATAGCCAAAGTCACATTGCCCAAACAGGATAGGGAAGGAGATATTTCTTTGTTGGACACGATATCCAATAATAAAGGCAGCACTTTGGATGCTGGTGATGAAGAGTTAATCCCTGAAGTTGAGGAGCATGATTCATTGTCATTGGAAGGTGATCGGATTATTGATAGTTCATGCTCTCATTCGGCAATAAGTGAGAACAGTAGCATGTGTGGGGAGGAGTTCATCAATTTTGAGGCTAATTCAGATGTCGGGAAACCATGTTCCATAGATATAGAGAAGAGCATATGTGGTGTCAATATTGTTGCCCGACCTGCTGATTTGGTGCCAAATGTCCAGACAGATATTATGAGTGAACCCCTTTCTGTTGCAGGTAGCCTTGAAGAAGAGACCGATGTAGGATCTGTCTCTGAGCCTTCTGCAATTGGTCTTCATCAGCAGGAAAAAGGAGCAGGTGGAACAGTGGGGCGGAGCGTTTTTGAATTGGATTATGCACCACTTTGGGGATTTATATCTCTGTGTGGAAGAAGACCAGAGATGGAAGATGCAGTTACAACCATACCTCGATTTTTGAAAATTCCTATTCAAATGCTAATTGGTGATCGGGTACTTGATGGAATGAACACGTGTTTCAATCAGCAGATGATTCATTTCTTTGGAGTTTATGATGGCCATGGTGGCTCTCAGGTGGCAAAGTATTGTCGTGATCGTATCCATTTGGCCTTGGCCGAGGAAATAGAACTTGTGAAGGAAGGTCTCAATAGTGGGAGCATCATAGATGGTTGTCTAGATCAGTGGAAGAAAGCTTTCACCAATTGTTTCTTGAAGGTTGATGCTGAAGTTGGAGGGAAAGTTAATAATGAACCTGTTGCTCCAGAAACTGTTGGTTCCACAGCTGTTGTTGCTATCATCTGTTCATCTCATATCATAGTCGCAAACTGTGGTGATTCAAGAGCGGTTCTTTGTCGTGGCAAAGAACCCATGGCTTTATCAGTGGATCATAAACCTAATCGAGATGATGAATATGCAAGAATTGAGGCAGCTGGTGGAAAGGTGATACAGTGGAATGGACATCGTGTATTTGGTGTTCTTGCAATGTCACGGTCTATTGGTGATAGATATTTGAAGCCATGGATTATTCCAGAACCAGAGGTTATGTTTCTTCCTCGTGCGAAAGATGATGAGTGTCTCATTCTGGCCAGTGATGGTCTGTGGGATGTCATGACGAATGAAGAGGTGTGTGACCTAGCTCGGAGACGGTTACTTCTCTGGCACAAGAAAAATGGCACGGAACTACCCTTAGAGAGGGGAGAGGGAATTGATCCTGCTGCACAAGCAGCAGCAGAGTACCTATCAAACCGCGCTCTTCAGAAAGGAAGCAAAGATAACATCACTGTCATTGTAGTAGATTTAAAAGCTCAGAGAAAATTTAAGACCAAGACATGA 1638 0.431 MEELSFAVAVPLRVGNSVCDKNPIIATTHMDASRFKLMGDAGLLSNSVTKLETVASSESGHNEVSIAKVTLPKQDREGDISLLDTISNNKGSTLDAGDEELIPEVEEHDSLSLEGDRIIDSSCSHSAISENSSMCGEEFINFEANSDVGKPCSIDIEKSICGVNIVARPADLVPNVQTDIMSEPLSVAGSLEEETDVGSVSEPSAIGLHQQEKGAGGTVGRSVFELDYAPLWGFISLCGRRPEMEDAVTTIPRFLKIPIQMLIGDRVLDGMNTCFNQQMIHFFGVYDGHGGSQVAKYCRDRIHLALAEEIELVKEGLNSGSIIDGCLDQWKKAFTNCFLKVDAEVGGKVNNEPVAPETVGSTAVVAIICSSHIIVANCGDSRAVLCRGKEPMALSVDHKPNRDDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAKDDECLILASDGLWDVMTNEEVCDLARRRLLLWHKKNGTELPLERGEGIDPAAQAAAEYLSNRALQKGSKDNITVIVVDLKAQRKFKTKT* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0057 545 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 106 545 - -
Lan10g0057 545 ProSitePatterns PPM-type phosphatase domain signature. 282 290 IPR000222 GO:0043169
Lan10g0057 545 PANTHER ALPHABET, ISOFORM E-RELATED 106 545 - -
Lan10g0057 545 Gene3D - 218 545 IPR036457 -
Lan10g0057 545 ProSiteProfiles PPM-type phosphatase domain profile. 231 535 IPR001932 -
Lan10g0057 545 SUPERFAMILY PP2C-like 228 536 IPR036457 -
Lan10g0057 545 CDD PP2Cc 236 535 IPR001932 -
Lan10g0057 545 Pfam Protein phosphatase 2C 268 528 IPR001932 -
Lan10g0057 545 SMART PP2C_4 217 533 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0057 Lan-Chr10 321014 325646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0057 1 545 PP2C-type Phosphatase Gene Family AT1G17550 48.399 2.73e-161 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0057 K14497 - gmx:100805281 827.394