Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0056 ATGAATGGTGGTACCAAGATGAGTGATAAAAATGAAAGAGCACAAGATTCTTCACCTGACACTGTTTTCACCAACTATTTGTCTGCTGAGCTATCTGAGTACTTCAAGTTTGATGATATTAATGAATGGCTAATTGATGATGATATAGAATCATTTGTTTCAAGCCAAGAGGTGCTTTATCATCAACCCAATGTTGCTAGTCATTTTATAAAAGGAGAAGTTAGCAGTGGATACCAGAAGAAAGTTAGAGAGAAATTTTCATTCAAAACAAAGTCAGAGGTTGATATCCTTGATGATGGGTACAAATGGAGGAAATATGGAAAGAAGATGGTGAAGAACAATCCCAACCCAAGGCATTACTATAGGTGTTCAGTGGAGGGTTGCCCTGTAAAAAAGACAGTAGACAGAGATAAGGATGATCCAATGTATGTAATAACAACCTACGAAGGAAGGCACAATCACCCGGACAAGGATCACCTATCCCATAGTTTTCTTGTCCCAAGTTCTTGTCCAATATGA 519 0.3796 MNGGTKMSDKNERAQDSSPDTVFTNYLSAELSEYFKFDDINEWLIDDDIESFVSSQEVLYHQPNVASHFIKGEVSSGYQKKVREKFSFKTKSEVDILDDGYKWRKYGKKMVKNNPNPRHYYRCSVEGCPVKKTVDRDKDDPMYVITTYEGRHNHPDKDHLSHSFLVPSSCPI* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0056 172 MobiDBLite consensus disorder prediction 1 20 - -
Lan10g0056 172 ProSiteProfiles WRKY domain profile. 92 157 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan10g0056 172 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 73 158 IPR044810 GO:0003700
Lan10g0056 172 SUPERFAMILY WRKY DNA-binding domain 90 155 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan10g0056 172 PANTHER WRKY TRANSCRIPTION FACTOR 50-RELATED 73 158 - -
Lan10g0056 172 Gene3D WRKY domain 84 150 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan10g0056 172 SMART WRKY_cls 97 156 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan10g0056 172 Pfam WRKY DNA -binding domain 98 155 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0056 Lan-Chr10 318016 319783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0056 33 154 WRKY Transcription Factor Family AT5G26170 46.667 2.07e-38 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan10g0056 WRKY 1.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0056 - - lang:109358189 365.54