Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0050 ATGGACCCTTTTCTTCCTCACCCTCTCATCTTCTCTACTACCCACTCTTCTTCCTCCTCCTCCTCTTCCACCACCACCACCACCAACTACATCGACCCTATGTTTTCAGGACTCACCTTCCAGACCCTCCTCTCCCTCAACCCTTCTCTCTTCTCCTCCTCCCTCTCCGACCACCACCCTCCTCCGCCACTGCCTCCACCACCACCCTTCAACTTGTTCCATCATCACCGCCGTTCTGATCCTCCACCTTGTAGAGCAGTTATCCCTCATATGAGAAGCAACCTTGCAAGACAGAGAAGGCAGAAGCTGAGTGAGAAAACACGTTGCTTGCAGAAACTCATGCCTTGGGACACTAAAATGGACCAAGCTACCCTTCTTCAACATGCTTACAAATATGTCAATGACTTGGAGAGGCTGAATAGGAACCAGCTTCTGCAGGTTCTGGTGAACTCACCAGTTGCACAAACAATGCTTTGTTCTCAAGGATTTTGTGTTTTCTCAATGGAACACTTGTTTCTCCTCACAAAGGATATTTCTTTTTCACAACCAGATCATCATGCATGCTTCTCTCCACAACAACAACCCTAG 588 0.483 MDPFLPHPLIFSTTHSSSSSSSSTTTTTNYIDPMFSGLTFQTLLSLNPSLFSSSLSDHHPPPPLPPPPPFNLFHHHRRSDPPPCRAVIPHMRSNLARQRRQKLSEKTRCLQKLMPWDTKMDQATLLQHAYKYVNDLERLNRNQLLQVLVNSPVAQTMLCSQGFCVFSMEHLFLLTKDISFSQPDHHACFSPQQQP* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0050 195 PANTHER TRANSCRIPTION FACTOR BHLH117 134 176 - -
Lan10g0050 195 PANTHER TRANSCRIPTION FACTOR BHLH117 74 134 - -
Lan10g0050 195 SMART finulus 93 142 IPR011598 GO:0046983
Lan10g0050 195 CDD bHLH_AtbHLH_like 90 138 IPR045239 -
Lan10g0050 195 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 92 149 IPR036638 GO:0046983
Lan10g0050 195 MobiDBLite consensus disorder prediction 54 76 - -
Lan10g0050 195 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 74 134 IPR045843 GO:0003700|GO:0006355
Lan10g0050 195 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 134 176 IPR045843 GO:0003700|GO:0006355
Lan10g0050 195 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 87 136 IPR011598 GO:0046983
Lan10g0050 195 Gene3D - 90 149 IPR036638 GO:0046983
Lan10g0050 195 MobiDBLite consensus disorder prediction 58 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0050 Lan-Chr10 275058 275741 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0050 99 174 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G22100 36.538 1.97e-15 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan10g0050 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0050 - - lang:109357899 319.701