Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0046 ATGGACATGGACATGGATTGCACAGGTTCCTCAACTGGTTGGCTTTATGATTATAACATTGATGTTGTTGAACATGATGACTTTATTATGGCTACAGACTCTGTTGCTTTCACCTGGCTGCCACAGACTCATACTTTCAATCATCCTGCTAATAATATCAGCTTGGATATGGAATACTCACTGGATTCAACTCTACTGGAAAATGGCCCTTCAAAGCGGTTTCTCGAATTGAGTTCTGTCTTGGAGCCTGGTAGGCCGCCCAAAGCAGACAAGGTCGCTATACTGAGCGATGCAGTTCACATGGTGACCAACTTAAGAAATGAAGCACAAAAGATGAAGGAGATGAATGATGAATTACTTCTCAAAGTTAGAGAACTGAAGGCTGAGAAGAAAGAGCTTCGCGACGAGAAGAATATGCTGAAGGCAGATAAGGAAAAGTTGGAGCAACAGGTCAAACTGACAAATGTGCAGCCAAGGTTCCTCCCTCATCCGGCAGTTGCTAAAGGGGCTGATGCAGCTAACCACAAGCTGATGCCTTTCATCGGTTACCCTGGAATCGCGATGTGGCAGTTCATGCCTCCTGCTATTGTTGATACATCAAAGGATCATCTGCTTCGGCCTCCAGTGGCATAA 633 0.4502 MDMDMDCTGSSTGWLYDYNIDVVEHDDFIMATDSVAFTWLPQTHTFNHPANNISLDMEYSLDSTLLENGPSKRFLELSSVLEPGRPPKADKVAILSDAVHMVTNLRNEAQKMKEMNDELLLKVRELKAEKKELRDEKNMLKADKEKLEQQVKLTNVQPRFLPHPAVAKGADAANHKLMPFIGYPGIAMWQFMPPAIVDTSKDHLLRPPVA* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0046 210 PANTHER BHLH TRANSCRIPTION FACTOR 72 210 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Lan10g0046 210 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 72 128 IPR036638 GO:0046983
Lan10g0046 210 Gene3D - 71 135 IPR036638 GO:0046983
Lan10g0046 210 Coils Coil 102 157 - -
Lan10g0046 210 PANTHER BHLH DOMAIN CLASS TRANSCRIPTION FACTOR 72 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0046 Lan-Chr10 261124 262719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0046 73 210 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 60.959 7.96e-56 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0046 - - gmx:100806838 271.166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1905 6 30055235 30058339 Lan10g0046 10 261124 262719 LSH