Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0041 ATGGGAGGCCTTAGTTACTTTAAGGTTTTGATTGTTTGTATTGTAGCATTAATTGCCTCCACTCATGCTCAATTGCAGCTTGGTTTCTATGCTGAGAGATGCCCAAAGGCGGAAGAAATCATTGCAGACTTTGTTCATGAGCATATCCACAATGCTCCATCACTTGCAGCTGCCTTAATTAGAATGCACTTCCATGATTGTTTTGTCAGGGGATGTGATGCATCACTACTTCTGAACTCAACAACCAACCAAGCTGAAAAGAATGCTCCACCAAATCTTACACTTAGAGGCTTTGACTTCATTGATAGGATAAAGAGTGTTGTTGAAGTTGAATGCCCTGGTGTTGTGTCTTGTGCTGATATAATAGCTTTGGCTGCAAGAGACTCCATTGTCTACACAGGTGGACCTTTCTGGAAAGTTCCAACAGGTAGAAGAGATGGAGTGATCTCTAACATAACAGAAGCCACAAACAGCATTCCTTCTCCATTTAGCAACTTCACCACACTCCGAACACTATTCTCCAATCAAGGACTTGATTTGAAAGACTTGGTCCTCCTCTCTGGTGCTCACACAATTGGTATTTCCCATTGCACATCATTCTCAAACCGTCTTTACAATTTTACTGGCAAGGGTGACCAAGATCCATCGTTAGATAGTGAATATGCAAAAAATCTAAAGACCTTAAAATGCAAGAATATAAATGATAATAGCACATTAGTTGAGATGGACCCTGGGAGCCGCAAAACATTTGATCTAGGCTACTATGGTGAGGTTGTTAAGAGAAGGGGTCTATTTCAGTCAGATGCAGCATTGTTGACGAACTCTGTTACAAAATCTCTAGTCCACCAATTCCTTCAAGGCTCACTTGACAATTTCTATGCTGAATTTGCCAAGTCGATTCAGAAATTGGGTCAAACTAAAGTCAAGACTGGGACACAAGGTGAAATCAGGAACCACTGTGCAGTCATAAATAGCTAA 978 0.41 MGGLSYFKVLIVCIVALIASTHAQLQLGFYAERCPKAEEIIADFVHEHIHNAPSLAAALIRMHFHDCFVRGCDASLLLNSTTNQAEKNAPPNLTLRGFDFIDRIKSVVEVECPGVVSCADIIALAARDSIVYTGGPFWKVPTGRRDGVISNITEATNSIPSPFSNFTTLRTLFSNQGLDLKDLVLLSGAHTIGISHCTSFSNRLYNFTGKGDQDPSLDSEYAKNLKTLKCKNINDNSTLVEMDPGSRKTFDLGYYGEVVKRRGLFQSDAALLTNSVTKSLVHQFLQGSLDNFYAEFAKSIQKLGQTKVKTGTQGEIRNHCAVINS* 326
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0041 325 CDD secretory_peroxidase 24 323 IPR033905 GO:0004601|GO:0042744
Lan10g0041 325 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan10g0041 325 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan10g0041 325 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan10g0041 325 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan10g0041 325 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan10g0041 325 Pfam Peroxidase 42 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan10g0041 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Lan10g0041 325 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan10g0041 325 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan10g0041 325 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan10g0041 325 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan10g0041 325 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan10g0041 325 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan10g0041 325 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan10g0041 325 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan10g0041 325 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan10g0041 325 Gene3D - 28 324 - -
Lan10g0041 325 Gene3D Peroxidase, domain 2 160 303 - -
Lan10g0041 325 ProSiteProfiles Plant heme peroxidase family profile. 24 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan10g0041 325 SUPERFAMILY Heme-dependent peroxidases 24 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lan10g0041 325 PANTHER PEROXIDASE 3 324 - -
Lan10g0041 325 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Lan10g0041 325 PANTHER PEROXIDASE 25-RELATED 3 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lan10g0041 Lan-Chr10 235965 237654 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0041 14 325 Peroxidase AT1G05260 67.308 1.22e-165 462
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0041 K00430 - gmx:547872 528.865
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1898 6 30025774 30028357 Lan10g0041 10 235965 237654 LSH
Lan10g0041 10 235965 237654 Lan7g0433 7 3095300 3097564 PCT
Lan7g0433 7 3095300 3097564 Lan10g0041 10 235965 237654 PCT