Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0032 ATGAAGCAGTTTAAGGTTTTGCACTTTGTAATTTGGATATGGGTAATCATACTTTGTGGTGTTGTTGCTCAGTGCCAAAGGCCTGAAAGTGTGAATATTGCTGCAGTTTTTACTTTTGATTCTGTCATAGGAAGAGCTGCCAAAGTGGCAATGGAAATGGCTGTTTCTGATGTTAATGGTGACCCTAGAGTTCTCAATGGGACCAAACTCAATTTGATAACGAAGGATGCAAGTTGCAGTGTCTTTCTGGGATCAATTGGAGCTTTTCAGGCCCTTGAGAAAGGGGTTGCAGCCATAATTGGTCCACAATCATCTGCCATAGCTCATATGATTTCTCAAATTGCTGATGCTGTGAAAGTGCCTTTGATTTCATATGGAGCCACTGATTCAACCCTCTCCTCTCTCCAGTTTCCTTTCTTTTTACGTACTACACATAGTGATTTGGAGCAAATGACAGCAATGGCTGATCTGATTGACTTTAATGGATGGAAGGAGGTAATTGCTGTATTCTTGGATGATGATTATGGAAGAAATGGAATATCTGCTTTGGGCAATGAGCTTGAAAGAAGGAGATTGAGAATTGCTTATAAGCTACGTTTGAGTATTCTTTTTGATGTGGATGAAATCAATAACCTGCTCAATCAATCCAAGGTGTTCGGTCCTCGTGTGTATGTTGTTCACGTCAATCCAGATCCGAGATTGAGAATCTTTACCGTTGCGCACAAGCTTCAAATGATAGCCAATGACTATGTCTGGCTTGTCACAGATTGGCTCTTTGCCACCCTAGATTCATTCTCCCCAGTGAATCAGACCACTCTTAGTGTTCTTCAAGGTGTTGTTGGTCTTCGTCAACACATTCCAGATTCCAGGAAAAAGAGATCATTTGTTTCTCGTTGGGAAAAAATGCAAAAAGAAGGGGTAGTAAATACAAGTTTGAATTCCTATGGATTTTATGCTTATGATACAATTTGGGCAGTTGCATTTTCAATTGATAAATTCATGGAAGTACATAATAATATTACCTTTTCTTTTGATAATCACTTCATGTTACCACGGACAGAAGAAACTGTTATTCAGCTCGACATGCTTAAAGTTTTTGATGGTGGGTCTGATCTGGTCAACATTCTGTTAGAATCAAATTTTACAGGTTTGAGTGGTCAAATTCAGTTTAGCTCAGACAGAAATATCATAAGTGGTGGTTATGAAGTTATCAATATCAATCAGATGGCAATTACTAGGGTTGGTTATTGGTATAATAATTCAGGATTTTCAGTAATGCCCCCTAAAATTCTCACAAACAAAGAACATAGAAGGTTTTTCCAAAATCAGAAGCTTGACAATATTACCTGGCCAGGTGGAAAGACTGAAAGACCACGTGGCTGGGTGATTGCTGATAATGCAAGACCACTGAGAATTGTAGTACCGAAGAGAGCAAGTTTTGTTGAATTTGTAACTGAACTGCAAGATAGTCATCAAGTTCAGGGGTACTGCATTGATGTCTTCACGAAAGCGCTGGAATTTATTCCATATGATGTTCCGTATGTATTCAAGCCTGTTGGGAATGGTATAGCAAATCCCAACTATGACGCACTTGTGGAAATGGTTGCCGAAAATGTATATGATGCAATTGTTGGAGACATTGCAATAGTGACAAATCGTACTAAGATTGTAGATTTTTCTCAGCCTTTTGCATCATCTAGCCTTGTTATAGTGGCACCTATCAACAACGCAAAATCAAATACTTGGGTTTTCCTCAAACCATTCACAGCAGATATGTGGGGTGCCACTGCTGCTTCATTTATGGCGATTGCGGTGGTCATATGGATTCTTGAGCACCGAGTTAACAGTGATTTCCGTGGTCCACCTAAGAGGCAAATCGTGACAATATTTATGTTCAGCCTCTCAACACTGTTTAAGACAAATCAGGAAAAGACAGTAAGCTCACTAGCTAAAATGGTGATGATTGTGTGGCTTTTCCTATTGATGGTTATCACATCTAGCTACACTGCAAGCTTGAGTTCAATTCTTACAGTGGAACAGCTTTCATCACCAATCACAGGAATTGATAGCTTGATTGCAAGTAACTGGCCTATTGGATACCAAGTAGGATCATTTGCTTATAGCTATCTCACAGAGAATCTTTATATACCAAGCTCAAGACTTGTTTCCTTAGGCTCCCCTGAGGAATATGCTATAGCTCTTCAGAAAGGTCCTTCTCATGGAGGGGTGGCAGCTATCATTGATGAGCTTCCATATGTCAATTTATTTCTTTCAAAACAAACTGATTTTGGTATTATTGGACAGCCATTTACCAGAGCCAGTTGGGGTTTTGCTTTTCCAAGAGAATCTCCTTTTGCCCTTGACATGTCTACAGCAATTTTGAAACTCTCTGAGAGTGGAGAGCTTCAGAAGATATACGAAAAGTGGTTTTGTAAGATGGGTTGTCCCGAAGAAAGGACAAGCAACTCTGAGCCTAACCAACTTCACTTGGTTAGTTTTTGGGGTCTATATCTCTTATTTGGTGCTGTCAGTCTCGCCGCAATTGTGGTGTTTCTGCTGCAAATTATATACCAATATGTCCGCTTCAAACAAAGCCAAAAGGATGTTGCTTCTTCATCCTCAAATTCACCATCCAGTAGTTGTTATCAGATTGTTATTAACATCTTTAACTTCATTGATAAGAAGGAAGAGGCCATCAAGAAAACGTTCACTCAAGGTGACAATCACCACAACCCAAACTGA 2742 0.3964 MKQFKVLHFVIWIWVIILCGVVAQCQRPESVNIAAVFTFDSVIGRAAKVAMEMAVSDVNGDPRVLNGTKLNLITKDASCSVFLGSIGAFQALEKGVAAIIGPQSSAIAHMISQIADAVKVPLISYGATDSTLSSLQFPFFLRTTHSDLEQMTAMADLIDFNGWKEVIAVFLDDDYGRNGISALGNELERRRLRIAYKLRLSILFDVDEINNLLNQSKVFGPRVYVVHVNPDPRLRIFTVAHKLQMIANDYVWLVTDWLFATLDSFSPVNQTTLSVLQGVVGLRQHIPDSRKKRSFVSRWEKMQKEGVVNTSLNSYGFYAYDTIWAVAFSIDKFMEVHNNITFSFDNHFMLPRTEETVIQLDMLKVFDGGSDLVNILLESNFTGLSGQIQFSSDRNIISGGYEVININQMAITRVGYWYNNSGFSVMPPKILTNKEHRRFFQNQKLDNITWPGGKTERPRGWVIADNARPLRIVVPKRASFVEFVTELQDSHQVQGYCIDVFTKALEFIPYDVPYVFKPVGNGIANPNYDALVEMVAENVYDAIVGDIAIVTNRTKIVDFSQPFASSSLVIVAPINNAKSNTWVFLKPFTADMWGATAASFMAIAVVIWILEHRVNSDFRGPPKRQIVTIFMFSLSTLFKTNQEKTVSSLAKMVMIVWLFLLMVITSSYTASLSSILTVEQLSSPITGIDSLIASNWPIGYQVGSFAYSYLTENLYIPSSRLVSLGSPEEYAIALQKGPSHGGVAAIIDELPYVNLFLSKQTDFGIIGQPFTRASWGFAFPRESPFALDMSTAILKLSESGELQKIYEKWFCKMGCPEERTSNSEPNQLHLVSFWGLYLLFGAVSLAAIVVFLLQIIYQYVRFKQSQKDVASSSSNSPSSSCYQIVINIFNFIDKKEEAIKKTFTQGDNHHNPN* 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0032 913 CDD PBP1_GABAb_receptor_plant 32 427 IPR044440 -
Lan10g0032 913 Gene3D - 146 423 - -
Lan10g0032 913 Gene3D - 581 710 - -
Lan10g0032 913 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 16 911 - -
Lan10g0032 913 Gene3D - 49 399 - -
Lan10g0032 913 Gene3D - 466 580 - -
Lan10g0032 913 Pfam Ligand-gated ion channel 811 842 IPR001320 GO:0015276|GO:0016020
Lan10g0032 913 CDD GluR_Plant 468 810 - -
Lan10g0032 913 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 44 60 - -
Lan10g0032 913 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 104 132 - -
Lan10g0032 913 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 235 258 - -
Lan10g0032 913 PIRSF IGluLR_plant 1 912 IPR017103 -
Lan10g0032 913 SUPERFAMILY Periplasmic binding protein-like I 25 462 IPR028082 -
Lan10g0032 913 Pfam Receptor family ligand binding region 48 407 IPR001828 -
Lan10g0032 913 SMART GluR_14 469 812 IPR001320 GO:0015276|GO:0016020
Lan10g0032 913 Gene3D - 756 817 - -
Lan10g0032 913 PANTHER GLUTAMATE RECEPTOR 3.7 16 911 - -
Lan10g0032 913 SUPERFAMILY Periplasmic binding protein-like II 449 810 - -
Lan10g0032 913 Pfam Bacterial extracellular solute-binding proteins, family 3 490 810 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0032 Lan-Chr10 180108 184925 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0032 15 911 Ion Channels AT2G32400 55.100 0.0 1018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0032 K05387 - gmx:100796389 1423.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1883 6 29907748 29910396 Lan10g0032 10 180108 184925 LSH
Lan8g1539 8 22458147 22464227 Lan10g0032 10 180108 184925 PCT
Lan13g0506 13 3756344 3761603 Lan10g0032 10 180108 184925 PCT