Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0026 ATGGATGCCACAGATAGTAACAACAGTATACAACCCTTCCAAGTCAACCTTAGCTGCAGTAGTCCTTCACCCTCTCAAGATAACAACAACAACAATAACAATGAGAGACCCTTCATTGATGAGATGGACTTCTTCTCTCTTCATCATAACAACATTAACAATATTGCTTCTTCCTCTACCTCTGCACCACCACCTCACATACATCATCATCATCATCATCATGTTCCTTCCACCACTACTCCTATCTTCGATTTCAAAGTAAACACTGGTCTCAACCTTCGTACTACCAGCAGTGATCAATCTATGGTGGACGATGATATCTCACTAAATTCAGAAGAAAAAAGAACTAAGAATAAGCTGGTTGTTCTTCAAGCGGAGCTGAGGCGAATGAAGGTGGAGAATCTTCGGTTGAGGAGCCTGGTTGATGATGCTAAATCCAATTACAATGACTTGCATGTGCATTTGTTGAATTTGATGCAAGAAAAGAAGGGTGAGGACACAGAAGAACAACACCAACAAGTGTTTGATGGAAAACTAAAAGACAAGAAACAAAGTGGGAATGGAGGAGCCTTAGTGCCAAGGCAGTTTATGGATCTTGGGTTGGCTACTAATGCTGCTGATATTGGAGAGGTGGCTTCCAAGGAATTAGAGAATCACATGAAGAATGGGGATGCTAGTGATGAAGGACTTGTAGTGTTTGATCAAGACAAAAAGGAAATCCATAGAGGAATTGAGAGAGAGGATAGTCCACCAGATCAGGTTTTGAGTACTAATAGAGTTCCAAGGTTTAGTCCTACAAATGATCAAACTGAGGCCACTATGAGGAAGGCTAGAGTTTCGGTTAGAGCTCGATCAGAGGCACCCATGATCACTGATGGGTGTCAATGGCGAAAATATGGGCAGAAGATGGCCAAAGGAAACCCATGTCCTAGAGCATATTACCGGTGCACCATGGCTTCAGGTTGCCCTGTAAGAAAACAGGTACAAAGGTGTGCCGAAGACAAAACAATACTTATCACAACATATGAAGGAAATCACAACCACCCTTTGCCTCCTACAGCTATGGCAATGGCACAAACAACTTCTTCAGCTGCAAGAATGCTGCTTTCAGGATCCATGTCAAGCGCGGATGGCCTAATGAATGCAAACTTCCTCACAAGAACACTCCTTCCATGCTCTTCAAGCATGGCAACTATCTCAGCATCAGCACCATTCCCAACTGTCACATTGGACTTAACTCAACCTCCAAACACTTCACACTTACCAAAGCCCCAAACTCAATTCCAAATCCCCTTCCAGCAAGGTGTCAATTCCACACCTTCATTATTGCCTCAGATAATTGGTCAAGCACTCTATAACCAATCACTGTTTTCTGGTCTTCAAATGTCTCAAGATGGTAATCAATCACAACAGCAACAGCCACAAATTGCTGACACAGTTGGTGCTTCCATTGCAGCTGATCCTAACTTGACTGCAGCTTTGGCTGCAGCTATTACTTCAATCATTGGTGGTGCTCAACCAAATAATAACAACAACAACAACAACACTAGTACATCCAATAACAGCAATGGCAATATTACATCAAGTAACAACTAA 1596 0.4248 MDATDSNNSIQPFQVNLSCSSPSPSQDNNNNNNNERPFIDEMDFFSLHHNNINNIASSSTSAPPPHIHHHHHHHVPSTTTPIFDFKVNTGLNLRTTSSDQSMVDDDISLNSEEKRTKNKLVVLQAELRRMKVENLRLRSLVDDAKSNYNDLHVHLLNLMQEKKGEDTEEQHQQVFDGKLKDKKQSGNGGALVPRQFMDLGLATNAADIGEVASKELENHMKNGDASDEGLVVFDQDKKEIHRGIEREDSPPDQVLSTNRVPRFSPTNDQTEATMRKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMASGCPVRKQVQRCAEDKTILITTYEGNHNHPLPPTAMAMAQTTSSAARMLLSGSMSSADGLMNANFLTRTLLPCSSSMATISASAPFPTVTLDLTQPPNTSHLPKPQTQFQIPFQQGVNSTPSLLPQIIGQALYNQSLFSGLQMSQDGNQSQQQQPQIADTVGASIAADPNLTAALAAAITSIIGGAQPNNNNNNNNTSTSNNSNGNITSSNN* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0026 531 MobiDBLite consensus disorder prediction 247 284 - -
Lan10g0026 531 MobiDBLite consensus disorder prediction 504 531 - -
Lan10g0026 531 Gene3D WRKY domain 275 352 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan10g0026 531 MobiDBLite consensus disorder prediction 1 37 - -
Lan10g0026 531 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 25 525 IPR044810 GO:0003700
Lan10g0026 531 Pfam WRKY DNA -binding domain 292 349 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan10g0026 531 SUPERFAMILY WRKY DNA-binding domain 283 351 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan10g0026 531 PANTHER OS05G0567200 PROTEIN 25 525 - -
Lan10g0026 531 SMART WRKY_cls 290 350 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan10g0026 531 MobiDBLite consensus disorder prediction 54 78 - -
Lan10g0026 531 MobiDBLite consensus disorder prediction 251 274 - -
Lan10g0026 531 Coils Coil 113 133 - -
Lan10g0026 531 ProSiteProfiles WRKY domain profile. 285 351 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0026 Lan-Chr10 132199 134779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0026 87 514 WRKY Transcription Factor Family AT1G62300 52.097 3.05e-131 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan10g0026 WRKY 2.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0026 - - lang:109357814 872.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1873 6 29823675 29826866 Lan10g0026 10 132199 134779 LSH
Lan10g0026 10 132199 134779 Lan7g0416 7 2925653 2928414 PCT
Lan10g0026 10 132199 134779 Lan13g0516 13 3889206 3892347 PCT
Lan7g0416 7 2925653 2928414 Lan10g0026 10 132199 134779 PCT
Lan13g0516 13 3889206 3892347 Lan10g0026 10 132199 134779 PCT