Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0020 ATGGACATGATGGGAACCGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCACTCTAGCGGTTAGTGTTCCATGCAGCAGTTTGCTGACCATAGTGACGGTTAGATGTGGGCATTGTGCCAATTTGATATCAGTTAACATGGGAGCATCCCTTCAAACATTTCCTCCTCAAGATCCTCAGAACTTAAGCTTTCAAGAACCGAGCAGCAAGGAAATGGGATCATCTTCGTCGTCATCATCGTCATCATCAAAATGCAACAAATTTGCAGCATTTGAAGCTGTAGAGCACCACAACCAGCAACATAGGATTCCTCCAATTCGTCCTCCTGAGAAGAAGCAACGTGTTCCTTCTGCTTATAATCGATTTATCAAAGATGAAATCCAAAGAATCAAGGCTAGTAATCCAGATATTAGCCACAGAGAAGCTTTTAGCGCAGCAGCCAAAAACTGGGCTCATTTCCCACATATTCACTTTGGGTTAAAGCTTGATGCCAACAAGCAAACAAATCTGCAGGCTGAGGGAACTCAAAAATCTAAGGGATTTTACTGA 555 0.4288 MDMMGTERVCYVHCNFCNTTLAVSVPCSSLLTIVTVRCGHCANLISVNMGASLQTFPPQDPQNLSFQEPSSKEMGSSSSSSSSSSKCNKFAAFEAVEHHNQQHRIPPIRPPEKKQRVPSAYNRFIKDEIQRIKASNPDISHREAFSAAAKNWAHFPHIHFGLKLDANKQTNLQAEGTQKSKGFY* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0020 184 MobiDBLite consensus disorder prediction 58 86 - -
Lan10g0020 184 PANTHER PROTEIN YABBY 6-RELATED 1 184 IPR006780 GO:0007275
Lan10g0020 184 SUPERFAMILY HMG-box 107 155 IPR036910 -
Lan10g0020 184 Pfam YABBY protein 6 162 IPR006780 GO:0007275
Lan10g0020 184 Gene3D High mobility group box domain 97 175 IPR036910 -
Lan10g0020 184 PANTHER AXIAL REGULATOR YABBY 2-RELATED 1 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0020 Lan-Chr10 105432 110846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0020 4 184 C2C2-YABBY Transcription Factor Family AT1G08465 59.239 2.53e-71 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Lan10g0020 YABBY 5.7e-72 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0020 K25796 - gmx:100500091 287.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0020 10 105432 110846 Lan3g0015 3 173284 177380 LSH
Lan10g0020 10 105432 110846 Lan7g0406 7 2843342 2848181 PCT
Lan10g0020 10 105432 110846 Lan8g1565 8 22686728 22693299 PCT
Lan7g0406 7 2843342 2848181 Lan10g0020 10 105432 110846 PCT
Lan8g1565 8 22686728 22693299 Lan10g0020 10 105432 110846 PCT