Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0019 ATGGATCCCTTGATCCGCAAGTTCCGGCGCCACCTTCTCTCTTGGCTTCACCGATCTCGTTCCGATTCGGTGCTCTTTGTGAGGAGAGTTTCATACAAGGATGTTAGAAGTGCAACAGATGGTTTCCGCAGAATTATTTATACCAATTCTGAAGTTTCTGCATATGCTGCCAATTTTGAAGACAACGGTGTTTGTTTGGTAAAAGAAGTGAAACATTTTGATGATGAAGCAAATAGTGACACTTTCTTCAGACAAGTGCAACTCTTGGGGCGGTTGCATCATCGCCACCTTCTTTCACTCAAAGGCTTCTCTCTCGGACCTAAACACAACAGACTGCTCATATTTGACAATATAGAAAATGGAAGCTTAAAGGAGCATCTCAATGACCCTTTAAAGACTCCCTTAAATTGGAGGACAAGGTTAAAGATCGCTAATGATGTTGTGGCTGCGCTGGAATACTTGTTTCTTTTCAGTGAACCATCAGTATGTCATGTCTCCATAAGCTCAAGCAATATCATGTTAGATGAGAACTTCACAGCTAAACTATCCGACTTTGGGTTTTTTACTCCTGGTGGAAATTCTGTTGTGACGCCATCTTCAAAAGATTGCATGGGGCAGATTGGATTCCAACTTGGAGTACTCATACTAGAACTGGTCACAGGTCAGTCTTCGGAGATGGAAGGTTCAGATCTAATAGAATGGATCCAAGAATCTCGATTTTACAGTTCCATAGATAAGATGATAGATCCTGATCTTGGAAACAACTACGACTGTACGGTGCTTAAAAGTCTCCTAGCCGTGGCTAAATTATGTATCAAATCAAAGGACAAGGCTTCTTCATTTACAATGCCTCAGTTATTTCGTTATCTCCAAATGAGGACTGATATATGA 891 0.4119 MDPLIRKFRRHLLSWLHRSRSDSVLFVRRVSYKDVRSATDGFRRIIYTNSEVSAYAANFEDNGVCLVKEVKHFDDEANSDTFFRQVQLLGRLHHRHLLSLKGFSLGPKHNRLLIFDNIENGSLKEHLNDPLKTPLNWRTRLKIANDVVAALEYLFLFSEPSVCHVSISSSNIMLDENFTAKLSDFGFFTPGGNSVVTPSSKDCMGQIGFQLGVLILELVTGQSSEMEGSDLIEWIQESRFYSSIDKMIDPDLGNNYDCTVLKSLLAVAKLCIKSKDKASSFTMPQLFRYLQMRTDI* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0019 296 PANTHER OS01G0253100 PROTEIN 1 294 IPR045271 GO:0004714|GO:0006468
Lan10g0019 296 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 294 - -
Lan10g0019 296 Pfam Protein tyrosine and serine/threonine kinase 60 188 IPR001245 GO:0004672|GO:0006468
Lan10g0019 296 ProSiteProfiles Protein kinase domain profile. 32 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0019 296 Gene3D Transferase(Phosphotransferase) domain 1 210 295 - -
Lan10g0019 296 Gene3D Transferase(Phosphotransferase) domain 1 118 209 - -
Lan10g0019 296 SUPERFAMILY Protein kinase-like (PK-like) 56 252 IPR011009 -
Lan10g0019 296 Gene3D Phosphorylase Kinase; domain 1 17 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0019 Lan-Chr10 101446 103761 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0019 28 295 Receptor kinase-like Gene Family AT3G19300 37.201 4.72e-53 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Lan10g0019 PK_Tyr_Ser-Thr 1.9e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0019 - - aprc:113853565 435.647