Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0018 ATGTGGGCATGGAAAAGATATTTCAAAGAGCTGGCCCAAGCTTATGAGGTTTTGAGTGACCCTGAAAAGCGTGAGATATATGATCAATATGGTGAAGATGCACTCAAGGAAGGAATGGGCGGCGGCGGCGGCGGCGGTGGTGGTCATGACCCATTTGACATCTTCCAATCTTTCTTTGGCGGGAGTCCATTTGGCAGTGGTGGTGGTAGTCGAGGAGGACGGAGGCAGAGAAGGGGTGAAGATGTGGTTCACCCACTCAAGGTCTCTTTGGATGATCTTTACCTTGGGACATCTAAGAACCTCTCTCTTTCACGAAATGCATTATGCTCAAAATGCACCGGAAAAGGCTCAAAATCTGGGGCTTCAATGAAGTGTGCTGCCTGTCAAGGAACCGGTATGAAGGTTTCAATTAGGCACCTTGGTCCCTCTATGATTCAGCAAATGCAGCATCCTTGCAATGAATGTAAGGGTACCGGAGAAACAATCAGTGAGAAAGACCGATGCACACAGTGCCAGGGGGAGAAGGTGGTCCAGGAGAAGAAAGTGCTACAAGTTATTGTGGAGAAGGGTATGCAGAATGGACAGAAGATTACATTCCCTGGTGAAGCTGATGAAGCGCCGGATACAATCACTGGGGATATTGTGTTCGTTCTACAGCAGAAGGAACATCCCAAGTTCAAAAGAAAGGCAGAAGACCTTTTTGTTGAGCACACTCTGTCCCTCACAGAGGCTTTATGTGGCTTCCATTTTGTGCTGACACACTTGGATGGTCGACAACTCCTTATCAAATCAAACCCTGGAGAGGTTATTAAGCCTGATTCATACAAGGCAATAAATGATGAAGGAATGCCATTGTACCAGAGGCCATTCATGAAAGGAAAGCTATACGTTCACTTCAGTGTGGAATTCCCTGATTCTGTGAGTCCTGATCAGGTGAAGGCTTTAGAGGCTGTTCTTCCATCAAAGCCTCCATCTCAGTTAACAGACATGGAGTTGGATGAGTGCGAGGAGACAACACTACATGATGTGAACATGGAAGAAGAGTTAAGGAGGAAGCAGCAATATCAACAACAGGAGGCATATGATGAGGATGAGGATATGCACGGTGGTGGTCAGAGAGTGCAGTGCGCTCAGCAGTGA 1140 0.4711 MWAWKRYFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGGGGGGHDPFDIFQSFFGGSPFGSGGGSRGGRRQRRGEDVVHPLKVSLDDLYLGTSKNLSLSRNALCSKCTGKGSKSGASMKCAACQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETISEKDRCTQCQGEKVVQEKKVLQVIVEKGMQNGQKITFPGEADEAPDTITGDIVFVLQQKEHPKFKRKAEDLFVEHTLSLTEALCGFHFVLTHLDGRQLLIKSNPGEVIKPDSYKAINDEGMPLYQRPFMKGKLYVHFSVEFPDSVSPDQVKALEAVLPSKPPSQLTDMELDECEETTLHDVNMEEELRRKQQYQQQEAYDEDEDMHGGGQRVQCAQQ* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0018 379 MobiDBLite consensus disorder prediction 337 370 - -
Lan10g0018 379 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 7 379 IPR044713 GO:0006457|GO:0030544
Lan10g0018 379 Gene3D - 223 305 - -
Lan10g0018 379 Pfam DnaJ C terminal domain 83 304 IPR002939 -
Lan10g0018 379 PRINTS DnaJ domain signature 3 23 IPR001623 -
Lan10g0018 379 PRINTS DnaJ domain signature 23 42 IPR001623 -
Lan10g0018 379 CDD DnaJ_zf 109 175 IPR001305 GO:0031072|GO:0051082
Lan10g0018 379 CDD DnaJ_C 80 306 - -
Lan10g0018 379 PANTHER CHAPERONE PROTEIN DNAJ 2-RELATED 7 379 - -
Lan10g0018 379 Gene3D DnaJ domain 3 70 IPR036869 -
Lan10g0018 379 SUPERFAMILY HSP40/DnaJ peptide-binding domain 75 234 IPR008971 GO:0006457|GO:0051082
Lan10g0018 379 ProSiteProfiles dnaJ domain profile. 1 31 IPR001623 -
Lan10g0018 379 MobiDBLite consensus disorder prediction 334 379 - -
Lan10g0018 379 SUPERFAMILY Chaperone J-domain 7 71 IPR036869 -
Lan10g0018 379 ProSiteProfiles Zinc finger CR-type profile. 96 180 IPR001305 GO:0031072|GO:0051082
Lan10g0018 379 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 106 178 IPR036410 -
Lan10g0018 379 Pfam DnaJ central domain 109 175 IPR001305 GO:0031072|GO:0051082
Lan10g0018 379 ProSitePatterns Nt-dnaJ domain signature. 8 27 IPR018253 -
Lan10g0018 379 Gene3D - 109 175 - -
Lan10g0018 379 Gene3D - 71 221 - -
Lan10g0018 379 SUPERFAMILY HSP40/DnaJ peptide-binding domain 226 315 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0018 Lan-Chr10 99270 101442 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0018 K09503 - twl:119980998 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0018 10 99270 101442 Lan7g0404 7 2800997 2817051 PCT
Lan10g0018 10 99270 101442 Lan8g1570 8 22721181 22726910 PCT
Lan10g0018 10 99270 101442 Lan13g0525 13 3959392 3961704 PCT
Lan7g0404 7 2800997 2817051 Lan10g0018 10 99270 101442 PCT
Lan8g1570 8 22721181 22726910 Lan10g0018 10 99270 101442 PCT
Lan13g0525 13 3959392 3961704 Lan10g0018 10 99270 101442 PCT