Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0012 ATGGCCACCAAAATGGAACTTTCCATCTTTCTCTTTTTCAGCCTAATTATTACAATGTGTCATGGTGCCACAAACCCAAATGATCTCAAAGTTCTGAATGATTTCAGAAAAGGGTTGGAAAATCCAAAGCTTCTAAAATGGCCAGAAAATGGAGATAACCCTTGTGGTCCTCCTTCATGGCCTTTTGTGTTCTGTTCTGGAGATAGGGTCACTCAGATTCAAGCTAAGAATCTTGGTCTTAGAGGTTCATTACCTCAAAACTTCAATCAACTCTCAGAACTCTACAACTTGGGTCTTCAAAGGAACAACCTTAGTGGAATTTTACCTAGTTTCAGTGGATTATCCAAACTGCAATTTGCTTTCTTGGATTACAATGCATTTGATGCGATCCCCTCCGACTTCTTTAATGGACTCAGCAGCCTTAGGGTTTTGTCTTTGGAGGAAAATTCACTGAATGCAAGTGCTGGTTGGTTATTCCCCATGGATTTACAAAAATCGGTGCAATTGACAAATCTTTCTCTTGTGCACTGTAATCTGGTTGGGGCATTGCCTGATTTTCTAGGCACATTGCCATCCCTCACAAATTTGAGGCTTTCAGGCAACAAACTATCCGGTACTATTCCTGCAAGTTTTGCTCAATCTTCATTCCAGGTTTTGTGGTTGAATGATCAAGAAGGCGATAAACTAACCGGTCCTATCAATGTTTTCACTTCAATGTTTTCCCTAAGACAACTTTGGCTACACGGAAACCAGTTCACAGGGAAAATTCCACAGGATATTGGAAATCTCACTTCCTTACAGGAACTCAACCTTAATAGCAATCAACTTGTTGGCATGATTCCAGATTCGCTAGCAGATATGGACCTTGAGATATTGGTATTGAATAATAACAAGTTAATTGGTCCGATACCTGAGTTTAAGGCTGCCGATGTTTCTTTTGATAACAATTTCTTTTGTCAGCCTAAGCCGGGGCTTGAATGTGCACCTGAAGTTACTGCACTACTGGATTTTCTGGATGATCTGAATTATCCATCATTTCTCATTAATGATTGGTCAGGTAATAAACCATGCACAGAAAGCACAGGTTCATGGTTTGGATTGAGCTGCAATTCCAACTCAGAGGTATCTATGATAAACTTACCAAAGCAAAGGCTCAATGGTACTTTGAGTCCCTCACTTGCTAAATTAGAATCACTCCTTGAAATTAGGCTGGATGGAAACAATATAGCTGGCACAGTTCCTAGTAATTTTACTGAATTGAAATCTTTGAGATTGTTGGACTTAAGTGATAACAATTTTGAGCCTCCATTACCAAACTTTCATGATGGTGTGAAGGTTATAACTGAAGGTAATCCTCTTCTTGTGAATCAAATTGGACCTATTAGAAGTCCACCACCCGAAGATTCACATTCTTCAGTGCATAACGTCTCGCCTCCTTCATCATCTCATAAGTCACTTGTTCCAAGCAAGAGCTCAATTTCAATTCAATCCAGACCAAATGGCTTCAAAAGATTGAAAATAATAGCAACAGTGGCTGGTGTTGCAGTCCTTGCATTTTTAGCAATTTGTATTGTTTATCTGTTCATATGTTGCTGGAAGAAGAAAAAAGCCACAACGGAAGCTCCAAGTTCCATTGTGGTTCACCCTAGAGATCCAACTGCTCCAGAAAACATGGTTAAAATTGCAGTCTCAAATAGCACCACCACTGTGGGAAGCTTATCAACAAAGATGGGCACAAGTTCTCTCAGTAACATTAGTGGTGAAACTCAAAACTCTTATGTGACTAAGGCTGGAAACCTTGTGATCGCAGTTCAAGTACTGCGTATTGTTACGAATGACTTCGCTTCAGAAAATGAGCTAGGCCGTGGTGGATTTGGAACAGTTTACAAGGGTGAACTAGAAGATGGGACAAAAATTGCAGTTAAAAGAATGGAGCTTGGAGTTATTAGTAGTAAGGCACTGGAAGAGTTTGAAGCTGAAATCGCTGTTCTTTCCAAGGTTCGCCACAGACACTTGGTATCCCTATTAGGGTATTCCATTGAAGGCAACGAGAGACTTTTGGTCTACGAATATATGCCACTTGGTGCTCTAAGCCAGCATCTTTTTCATTGGAAAAGTTTGAAGTTGGAGCCTTTGTCGTGGTCACAAAGGCTTGCAGTAGCACTAGATGTTGCTAGAGGCATGGAATACCTTCATGGTCTAGCTCGTGAGACCTTCATCCACAGAGACCTCAAGTCTTCTAATATTCTACTTGGTGATGATTTTCGTGCAAAAGTTTCAGATTTTGGGTTGGTGAAGCTTGCACCGGATGGTGAGAAATCAGTAGTAACCAAACTTGCTGGGACATTTGGATACCTTGCTCCTGAATATGCAGTGATGGGGAAAATCACCACAAAAGTTGATGTGTTTAGCTATGGTGTGGTGTTGATGGAACTTCTGACTGGACTAATGGCGCTTGACGAGAGCCGGCCAGAGGAAAGCCGGTACCTCGCTGAATATTTTTGGCGAATTAAATCGAGCAAACAAAAACTCATGGCTGCGCTTGATCCAGCTCTTGGTGCAAGCGAAGATACATATGAGAGCATAACCATTGTAGCTGAACTTGCTGGACATTGCACTGCAAGAGAAGCGAACCATAGGCCAGATATGAGTCATGCTGTAAATGTACTAGTAGCACTAGTAGAGAAATGGAGACCAGTTGATGATGAATTATTAGATGACTACTATGGCATTGATTATAGTAGACCACTTCAGCAAATGTTGAAAATTTGGAAGGAAGCAGAAAGCAAAGAGTTTAGTTATGCTGCTAGTCTTGAAGATAGTAAAGGCAGCATAGCACTAAGGCCCTTAGGTTTTGCAGAATCATTTACTTCAGCTGATGCTCGATGA 2889 0.4098 MATKMELSIFLFFSLIITMCHGATNPNDLKVLNDFRKGLENPKLLKWPENGDNPCGPPSWPFVFCSGDRVTQIQAKNLGLRGSLPQNFNQLSELYNLGLQRNNLSGILPSFSGLSKLQFAFLDYNAFDAIPSDFFNGLSSLRVLSLEENSLNASAGWLFPMDLQKSVQLTNLSLVHCNLVGALPDFLGTLPSLTNLRLSGNKLSGTIPASFAQSSFQVLWLNDQEGDKLTGPINVFTSMFSLRQLWLHGNQFTGKIPQDIGNLTSLQELNLNSNQLVGMIPDSLADMDLEILVLNNNKLIGPIPEFKAADVSFDNNFFCQPKPGLECAPEVTALLDFLDDLNYPSFLINDWSGNKPCTESTGSWFGLSCNSNSEVSMINLPKQRLNGTLSPSLAKLESLLEIRLDGNNIAGTVPSNFTELKSLRLLDLSDNNFEPPLPNFHDGVKVITEGNPLLVNQIGPIRSPPPEDSHSSVHNVSPPSSSHKSLVPSKSSISIQSRPNGFKRLKIIATVAGVAVLAFLAICIVYLFICCWKKKKATTEAPSSIVVHPRDPTAPENMVKIAVSNSTTTVGSLSTKMGTSSLSNISGETQNSYVTKAGNLVIAVQVLRIVTNDFASENELGRGGFGTVYKGELEDGTKIAVKRMELGVISSKALEEFEAEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPLGALSQHLFHWKSLKLEPLSWSQRLAVALDVARGMEYLHGLARETFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPDGEKSVVTKLAGTFGYLAPEYAVMGKITTKVDVFSYGVVLMELLTGLMALDESRPEESRYLAEYFWRIKSSKQKLMAALDPALGASEDTYESITIVAELAGHCTAREANHRPDMSHAVNVLVALVEKWRPVDDELLDDYYGIDYSRPLQQMLKIWKEAESKEFSYAASLEDSKGSIALRPLGFAESFTSADAR* 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0012 962 ProSitePatterns Serine/Threonine protein kinases active-site signature. 739 751 IPR008271 GO:0004672|GO:0006468
Lan10g0012 962 SMART serkin_6 614 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0012 962 PANTHER OSJNBA0070M12.3 PROTEIN 2 962 - -
Lan10g0012 962 ProSitePatterns Protein kinases ATP-binding region signature. 620 642 IPR017441 GO:0005524
Lan10g0012 962 Gene3D Ribonuclease Inhibitor 329 457 IPR032675 -
Lan10g0012 962 MobiDBLite consensus disorder prediction 468 494 - -
Lan10g0012 962 SMART LRR_typ_2 420 442 IPR003591 -
Lan10g0012 962 SMART LRR_typ_2 190 213 IPR003591 -
Lan10g0012 962 SMART LRR_typ_2 263 286 IPR003591 -
Lan10g0012 962 SMART LRR_typ_2 114 137 IPR003591 -
Lan10g0012 962 SMART LRR_typ_2 396 419 IPR003591 -
Lan10g0012 962 SMART LRR_typ_2 91 113 IPR003591 -
Lan10g0012 962 SMART LRR_typ_2 138 161 IPR003591 -
Lan10g0012 962 SMART LRR_typ_2 239 262 IPR003591 -
Lan10g0012 962 CDD STKc_IRAK 620 890 - -
Lan10g0012 962 ProSiteProfiles Protein kinase domain profile. 614 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g0012 962 MobiDBLite consensus disorder prediction 457 494 - -
Lan10g0012 962 SUPERFAMILY L domain-like 24 306 - -
Lan10g0012 962 Gene3D Ribonuclease Inhibitor 26 323 IPR032675 -
Lan10g0012 962 Gene3D Transferase(Phosphotransferase) domain 1 692 907 - -
Lan10g0012 962 PANTHER OSJNBA0070M12.3 PROTEIN 2 962 - -
Lan10g0012 962 Pfam Leucine rich repeat N-terminal domain 329 370 IPR013210 -
Lan10g0012 962 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Lan10g0012 962 SUPERFAMILY Protein kinase-like (PK-like) 593 890 IPR011009 -
Lan10g0012 962 Pfam Protein tyrosine and serine/threonine kinase 617 888 IPR001245 GO:0004672|GO:0006468
Lan10g0012 962 Gene3D Phosphorylase Kinase; domain 1 575 691 - -
Lan10g0012 962 SUPERFAMILY L domain-like 329 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0012 Lan-Chr10 72377 76177 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0012 82 908 Receptor kinase-like Gene Family AT1G55610 30.795 4.47e-80 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Lan10g0012 PK_Tyr_Ser-Thr 3.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0012 - - gmx:100785090 1485.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0012 10 72377 76177 Lan3g0166 3 1072578 1074577 LSH