Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0005 ATGGATTTTTCATCACCGGTTAACACTTCATTGGATCTCAACATTAATCCCCCAAGATTTCATGAAAAAGTTCTTAAAAAGGAGGTGGAAAGCAATTTTTTCTCATTGGGTATGAGGATGTCTTCTGCAAAAGAAGAGCCCACTAGTGCCTTGGTGGAGGAGCTTAAGAGGGTGAGTGCAGAAAACAAGAAGCTGACTGAAATGCTGACGGAGATGTGTGAGAGCTACAACACTTTGAGAAGCAACTTGGTGGATTATATGAGGAATAATCCTGATAAGGATCAGCACAACTCATCATCCAAGAGAAGAAAGTCTGAGAGCAGCAACAATAACATTAGTAATGCAATGGGAGTAAATAATGGTAACTCTGAGAGCAGTTCAACTAATGAGGGATCATGCAAGAAACAAAGAGAAGAAGAGATCACCAAGGCAAAAATTTCTAGAGTTTATGTTAGGACAGAAGGATCTGATAGAAGCCTTATTGTGAAAGATGGATATCAGTGGAGGAAATATGGACAAAAGGTGACTAGGGATAACCCTTCTCCAAGAGCATACTTCAAATGCTCTTTTGCTCCAAGCTGCCCAGTAAAAAAAAAGGTGCAGAGAAGTGTGGAAGATCAATCCATTCTAGTTGCAACTTATGAAGGAGAACACAATCATCCTCACCCTTCTTCTAAAATGGAGGCAACATCAGGCTCTAGCCGCTGTGTGACCTTAAATTCAGCCTCTCCTAACTCTTCTGCACCAAAATCTAAAATGTCCAGCAACGAGTCTAAAAATCTAAATACAAACCCCGAAGTGGCACAGACTTTGGTGGAACAGATGGCAAACTCCTTGACCAAGGATCCTAACTTTAGAGCAGCACTTGTTGCTGCCATGTCAGGAAGAACATTGCACAAGTATAAAGTAGAAAACTAG 918 0.4096 MDFSSPVNTSLDLNINPPRFHEKVLKKEVESNFFSLGMRMSSAKEEPTSALVEELKRVSAENKKLTEMLTEMCESYNTLRSNLVDYMRNNPDKDQHNSSSKRRKSESSNNNISNAMGVNNGNSESSSTNEGSCKKQREEEITKAKISRVYVRTEGSDRSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSILVATYEGEHNHPHPSSKMEATSGSSRCVTLNSASPNSSAPKSKMSSNESKNLNTNPEVAQTLVEQMANSLTKDPNFRAALVAAMSGRTLHKYKVEN* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0005 305 MobiDBLite consensus disorder prediction 86 139 - -
Lan10g0005 305 MobiDBLite consensus disorder prediction 215 262 - -
Lan10g0005 305 Gene3D WRKY domain 145 224 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan10g0005 305 ProSiteProfiles WRKY domain profile. 157 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan10g0005 305 MobiDBLite consensus disorder prediction 225 262 - -
Lan10g0005 305 Pfam WRKY DNA -binding domain 163 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan10g0005 305 MobiDBLite consensus disorder prediction 104 130 - -
Lan10g0005 305 PANTHER TRANSCRIPTION FACTOR 1 300 - -
Lan10g0005 305 SUPERFAMILY WRKY DNA-binding domain 160 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan10g0005 305 MobiDBLite consensus disorder prediction 87 103 - -
Lan10g0005 305 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 300 IPR044810 GO:0003700
Lan10g0005 305 SMART WRKY_cls 162 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0005 Lan-Chr10 41904 43983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0005 4 296 WRKY Transcription Factor Family AT1G80840 52.885 4.95e-96 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan10g0005 WRKY 2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0005 - - gmx:100798375 379.407