Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1735 ATGCTCAGCGGTGCCAGCAATAATAATACTGAAGATGGCAATAACAATAATGGTGGTAGTCCTTTGACTAGTGCCTCTAATAACTCTAGTAAATTTAGCAGTGAAGAGCACACTCACAGTCAGAAGCTACAGCATTCCCATTCCGGACAAAGGAAAATGGTGAGAAAGAGGATGGCTTCTGAGATGGAACCTACTCATACCATGCTGCCACATGGTGCTGTTGTTGGTGGTAGGTTTCCTCGCCGGTGCAACGACGATAACATGTCTTTACTACTAAATTGTTCTTCTTTACCTCCCGCTGTAGAAAAAACAACTAGTTTTAATAACAACGACTATCATTATAAAACTAGTTCCTCTTCAAAAGTAGATAATAACGTCGCTGTTGTTCCAAACCCCACTACTCCCAACTACTCCACTATGCTACTACCCTCTTCTTCTTGTTCTACAACCATCAACCCCAACTATCACATTAGTCAGAGGCAACAACAGGATCAGAATCAACTTACATCACCTGCAGTGTGTGGATTCTCGGGTTTGCCCCTCTTTCCTGCATCTCAGCAAAGAAATCATCATCACAATAGTAGTAGTAGTAGTAGTACTGGTGCTAATGTTGAGGTGGCTGCTTCTCCTTCCATGGAAGACAATAACAACAACTCAGCAGCCACTGCTTGGATCGATGGTATATTGAAGGATCTTATCCATAGCTCCAACAGTGTTTCCATTCCTCAACTCATCAACAACGTTAGAGAGATTATATACCCTTGCAACCCCAACCTCGCTGTTGTGCTTGAATACAGGCTGCGTCTTCTCACCTCTCATGACAACACCTCTGCTGCTCCAAACAACGACTCACCTAACTCTTCAGCAGTTGGAAAAAACAATACTACCGAAGTGGGAGTGGTTTTGAACCAAAACCATAGGCCCTTACCCTCAACTACCACTACTGTTAATGTTATACCTGATAATTTCCCACCAGATCCATCAGGTGCTGCTCCTCTAGTTATGAATCAGATGTTGTCCAATTGGGTTGTGCTTCCAATCACCCATGATGGAACTTCTTCAGTGGTTGCTACTGCTTTACCAGCTCATCATAATGATATCAGTCATCAAGAGGAATGTTGTGATATTGTTGCTACTGCACCAGACACAACAAGAAAGAAGAAAGAAGAGACGCGGCAACAGAAGAAAGACGAAGAGGGCTTGCACCTGCTCACTTTGCTGCTTCAATGTGCTGAAGCAGTTTCAGCTGAGAATCTGGAAGATGCCAATAAGATGCTGCTTGAGATTTCCCAGTTATCAACACCATTCGGTACATCAGCGCAACGAGTGGCAGCTTATTTCTCAGAAGCCATATCAGCAAGGCTAGTGAGTTCATGTTTGGGAATATATGCGACCTTGCCTTCAACACTAGTGTCCCACAGTAGTCACAAGGTAGCATCAGCATACCAAGTGTTCAACGGGATCAGTCCATTCGTCAAGTTCTCGCATTTCACAGCCAACCAGGCAATACAGGAAGCATTTGAGAGAGAGGAGAGGGTACACATAATAGATCTAGACATAATGCAAGGGCTTCAATGGCCAGGACTGTTTCACATTCTGGCTTCAAGACCTGGTGGGCCTCCTTATGTTAGACTCACTGGGCTTGGCACTTCAATGGAGGCACTTGAGGCTACAGGGAAGCGTTTGTCTGACTTTGCTAATAAACTTGGTCTTCCTTTTGAGTTCTCTCCCGTGGCTGATAAGGTTGGGAACCTTGACCCTCAAAGACTCAATGTTACTAAAACAGAAGCTGTTGCTGTCCATTGGTTACAACATTCCCTCTACGATGTCACCGGCTCTGATACCAATACCTTATGGCTTTTGCAGAGGCTGTCACCTAAAGTGGTGACGGTGGTAGAGCAGGACATGAGCAATGCAGGATCCTTCCTGGGAAGGTTTGTGGAAGCAATACATTACTACTCAGCACTGTTTGATTCTCTTGGGTCTAGCTATGGTGAGGAAAGTGAGGAGAGACATGTGGTGGAACAACAACTACTGTCTAGAGAGATTCGTAATGTTCTTGCAATTGGGGGCCCATCAAGGACCGGAGACCTCAAGTTTCATAACTGGAGAGAAAAGTTTCAGCAGTGTGGGTTTAGAGGTATCTCACTATCTGGTAATGCTGCCACTCAAGCCAGCTTACTCCTTGGCATGTTCCCATCTGAGGGATATACCCTTGTGGAGGACAATGGCATCCTCAAACTTGGTTGGAAAGACCTTTGCTTGCTCACTGCTTCTGCTTGGAGACCTCCCTTCCACCCTACTTCCGCCATTACCCATCATCATAACTAA 2331 0.4505 MLSGASNNNTEDGNNNNGGSPLTSASNNSSKFSSEEHTHSQKLQHSHSGQRKMVRKRMASEMEPTHTMLPHGAVVGGRFPRRCNDDNMSLLLNCSSLPPAVEKTTSFNNNDYHYKTSSSSKVDNNVAVVPNPTTPNYSTMLLPSSSCSTTINPNYHISQRQQQDQNQLTSPAVCGFSGLPLFPASQQRNHHHNSSSSSSTGANVEVAASPSMEDNNNNSAATAWIDGILKDLIHSSNSVSIPQLINNVREIIYPCNPNLAVVLEYRLRLLTSHDNTSAAPNNDSPNSSAVGKNNTTEVGVVLNQNHRPLPSTTTTVNVIPDNFPPDPSGAAPLVMNQMLSNWVVLPITHDGTSSVVATALPAHHNDISHQEECCDIVATAPDTTRKKKEETRQQKKDEEGLHLLTLLLQCAEAVSAENLEDANKMLLEISQLSTPFGTSAQRVAAYFSEAISARLVSSCLGIYATLPSTLVSHSSHKVASAYQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFANKLGLPFEFSPVADKVGNLDPQRLNVTKTEAVAVHWLQHSLYDVTGSDTNTLWLLQRLSPKVVTVVEQDMSNAGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEQQLLSREIRNVLAIGGPSRTGDLKFHNWREKFQQCGFRGISLSGNAATQASLLLGMFPSEGYTLVEDNGILKLGWKDLCLLTASAWRPPFHPTSAITHHHN 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1735 776 MobiDBLite consensus disorder prediction 185 216 - -
Lal9g1735 776 Pfam GRAS domain family 404 762 IPR005202 -
Lal9g1735 776 MobiDBLite consensus disorder prediction 1 63 - -
Lal9g1735 776 PANTHER PROTEIN SCARECROW 139 764 - -
Lal9g1735 776 ProSiteProfiles GRAS family profile. 394 762 IPR005202 -
Lal9g1735 776 MobiDBLite consensus disorder prediction 1 34 - -
Lal9g1735 776 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 139 764 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1735 Lal-Chr9 19550128 19553984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1735 376 763 GRAS Transcription Factor Family AT3G54220 81.313 0.0 661
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lal9g1735 GRAS 1.4e-126 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1735 - - lang:109325321 1183.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1976 2 21935878 21938895 Lal9g1735 9 19550128 19553984 LSH
Lal9g1735 9 19550128 19553984 Lal1g2338 1 25218242 25223340 LSH