Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1730 ATGCAAGGTCTAAGAATCCATGGATATGCCTTGGCTGTTTCGTTTTGTTTTATCATCTTCATAGCAGCCTCACAAAGAATACACCCTTCTGAAGGAAATGCACTGATTGAAATCAAGAAAAGTTTGATTGATCCAAAGGACAATCTGAGGAACTGGAATAAGGGTGATCCATGCACATCAAACTGGACTGGAGTTTGGTGTTTTGATGAAGTAGGGGATGATGGTTACTTCCATGTCCATGGACTCTACTTAATGGGTTTGAATCTCTCTGGAAGTCTAGCACCTCAGCTTGGTCAGCTATCTCATCTTGTGATACTGAGTTTCATGTGGAATAATCTGACTGGCGCCATACCAAAGGAGATTGGAAAACTTACATCTTTGGAACTATTGCTCCTGAATGGCAATAACTTATCTGGTAAACTATCAGATGAGCTTAGCAACCTTTCGAAGTTGGATAGAATCCAAGTCGACCAAAACCAGTTGTCAGGTCCTATTCCTGAATCATTTTCAAACTTGATCAATGTTAGACACCTCCACATGAACAACAATTCTTTCAGTGGTCAAATTCCACCTAACCTTTCAAAGCTACATAAACTTATGCACATGCTTATGGACAACAATAACTTATCTGGCTATCTTCCACCAGAATTCTCCATGTTACAGAATTTGCGCATACTCCAACTCGATAACAATAATTTTAGTGGGAATGGAATTCCTTCTACATATGCAAACTTAACCAATCTAGCAAAACTAAGTCTAAGAAACTGCACTTTGCAAGGAGCTTTTCCAAATTTCAGTTCAATACCCAAGCTTAGATTTTTAGATCTTAGCTGGAATCATTTTACCGGACACATACCATTAAATAAACTTGCAGACAAAATGACGACCATTGACCTGTCCAATAATTATCTCAACGGAACTATAACTCAAAGCTTCACATATCTTTCTCATCTTCAAAAATTGTCACTCAAAAACAATAACTTGTCAGGGTCCATCCCTGCTAGCATATGGCAGAACATAACCTTCAGTGTGAGAGGTAAACTTTTAATTGACCTCCGTAACAACTCGCTTTTAGATGTTTTGGGAAGTCTGAACCCTCCAGAAAATGTCACCTTGAGGCTTTCTGGAAATCCTATTTGCATCAATTCTAACATGCAAAATATTGGTCAATATTGTGAACCGGAAGAACATGTTTCCGTAGAGTCAACAAATTCAACAGTTGTATGTCCGGTTCAAGCTTGTCCAGTGGACAATTTCTATGAATATGCTCCCTCTTCCCCAGTTCCTTGCTTTTGCGCAGCCCCTCTAAGAATCGGATACAGGCTGAAAAGTCCGAGTTTTTCTTACTTCCCTCCATATAGAACTTATTTTCAATCGTATATAACTCGATCCTTGAACATGGACTTCTATCAATTATCAATAGATACGTATTCTTGGGAAGAGGGACCTCGCTTGAATATGTACTTGAAATTTTTTCCTAAGTACAGCGATTCACGCTCCAGTGTGTTCAATGTAAGTGAAGTCCGTCGCATTGAAGGCAAATTTACATCATGGAAATTTCCTTCAAATGATGTTTTTGGACCATATGAGCTCCTCAACTTCACTCTTCTGGGACCTTATGAAGATATAATTATTGATACAACGAGGAGAACAGTTAGTAAAGGTGTATTAGTTGCTTCTATACTAGCAGCTATTGCTTTTGTTTTAGCAATATCTGCATTAATCTTTTTTCTGAATTCCAGAAGGCATGTCAAATCCTTCCACAAGCTTTCGAGCAAACGTACATCCTCTAGCATATCTATCAAAATAGATGGTCTGAAAGCATTTACTCTTAAAGAATTGGCTCATGCTACTGACAAATTTAACAGTACAAATAAAGTTGGTCAAGGAGGTTATGGAAATGTCTATAAAGGCATTTTATCTGATGAAACATTCGTGGCAGTAAAGCGAGCAGAAGAAGACTCCTTACAAGGCCAAAAAGAGTTTTTGACTGAGATTGAGCTTTTATCAAGGCTACATCATCGAAATCTTGTCTCACTGATTGGATACTGCAATCAAGCTGGAGAGCAGATGCTGGTTTATGAATTCATGCCCAATGGCACCCTGAGGGACTGGGTTTCTGGTAAGAATATGAAAAAGGAAAGCCTAAGTTTTGGTATGAGGTTGCAAATTGCAAAGGGTGCAGCCAAAGGCATACTATATCTACATACAGAGGCCAACCCTCCTATATTCCACCGTGATATCAAAGCTAGCAACATACTCCTTGACTCCAATTTTATTGCTAAATTGGCCGATTTTGGACTGTCACGGCTTGCACCAATCCTAGATGATGAAGGAGATCTTCCTAACTATGTGTCAACAGTTGTGAAGGGAACACCAGGTTACCTGGATCCTGAATATTTGCTTACTCATAAGTTGACAGACAAATCTGATGTGTATAGTCTGGGAATTGTGTATCTGGAGCTTTTGACAGGCATGAAACCAATATCACATGGCAAAAACATTGTTCGAGAGGTTAATGTGGCTTGTGAATCTGGCATGATATATTCCATAATAGACAGCAGAATGGGTTTCTATCAATCTGATTGCTTAGACAAGTTTCTAAATCTAGCCCTCAGTTGTTGCCAAGATAATCCAGATTTGAGACCATCAATGTTAGATATTGTTAGAGAACTTGAAGATATCATTGCAATGTTTCCAGAAACAAATGATACTAATACTTTCTCTCATAATTCTTTTGGTAAACTACCACCTTCATCCTCATCATTGGCTTCATCATCATCAAATGTGACTAGAGATGATGAACAACAACAACAAATGTCTTCTTATGTGTCCGGTAGTGATCTTGTTAGTGGTGTTGTTCCCACCATTGTTCCTCGCTGA 2883 0.3871 MQGLRIHGYALAVSFCFIIFIAASQRIHPSEGNALIEIKKSLIDPKDNLRNWNKGDPCTSNWTGVWCFDEVGDDGYFHVHGLYLMGLNLSGSLAPQLGQLSHLVILSFMWNNLTGAIPKEIGKLTSLELLLLNGNNLSGKLSDELSNLSKLDRIQVDQNQLSGPIPESFSNLINVRHLHMNNNSFSGQIPPNLSKLHKLMHMLMDNNNLSGYLPPEFSMLQNLRILQLDNNNFSGNGIPSTYANLTNLAKLSLRNCTLQGAFPNFSSIPKLRFLDLSWNHFTGHIPLNKLADKMTTIDLSNNYLNGTITQSFTYLSHLQKLSLKNNNLSGSIPASIWQNITFSVRGKLLIDLRNNSLLDVLGSLNPPENVTLRLSGNPICINSNMQNIGQYCEPEEHVSVESTNSTVVCPVQACPVDNFYEYAPSSPVPCFCAAPLRIGYRLKSPSFSYFPPYRTYFQSYITRSLNMDFYQLSIDTYSWEEGPRLNMYLKFFPKYSDSRSSVFNVSEVRRIEGKFTSWKFPSNDVFGPYELLNFTLLGPYEDIIIDTTRRTVSKGVLVASILAAIAFVLAISALIFFLNSRRHVKSFHKLSSKRTSSSISIKIDGLKAFTLKELAHATDKFNSTNKVGQGGYGNVYKGILSDETFVAVKRAEEDSLQGQKEFLTEIELLSRLHHRNLVSLIGYCNQAGEQMLVYEFMPNGTLRDWVSGKNMKKESLSFGMRLQIAKGAAKGILYLHTEANPPIFHRDIKASNILLDSNFIAKLADFGLSRLAPILDDEGDLPNYVSTVVKGTPGYLDPEYLLTHKLTDKSDVYSLGIVYLELLTGMKPISHGKNIVREVNVACESGMIYSIIDSRMGFYQSDCLDKFLNLALSCCQDNPDLRPSMLDIVRELEDIIAMFPETNDTNTFSHNSFGKLPPSSSSLASSSSNVTRDDEQQQQMSSYVSGSDLVSGVVPTIVPR 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1730 960 ProSiteProfiles Protein kinase domain profile. 621 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g1730 960 Pfam Protein kinase domain 622 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g1730 960 MobiDBLite consensus disorder prediction 909 944 - -
Lal9g1730 960 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 11 926 - -
Lal9g1730 960 SUPERFAMILY L domain-like 45 388 - -
Lal9g1730 960 SUPERFAMILY Protein kinase-like (PK-like) 606 913 IPR011009 -
Lal9g1730 960 SMART LRR_typ_2 315 339 IPR003591 -
Lal9g1730 960 SMART LRR_typ_2 268 292 IPR003591 -
Lal9g1730 960 SMART LRR_typ_2 172 196 IPR003591 -
Lal9g1730 960 SMART LRR_typ_2 220 244 IPR003591 -
Lal9g1730 960 SMART LRR_typ_2 124 148 IPR003591 -
Lal9g1730 960 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 11 926 - -
Lal9g1730 960 Gene3D Transferase(Phosphotransferase) domain 1 697 912 - -
Lal9g1730 960 ProSitePatterns Protein kinases ATP-binding region signature. 627 649 IPR017441 GO:0005524
Lal9g1730 960 Gene3D Ribonuclease Inhibitor 289 435 IPR032675 -
Lal9g1730 960 Gene3D Ribonuclease Inhibitor 190 288 IPR032675 -
Lal9g1730 960 CDD STKc_IRAK 627 895 - -
Lal9g1730 960 Gene3D Phosphorylase Kinase; domain 1 591 696 - -
Lal9g1730 960 SMART serkin_6 621 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g1730 960 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Lal9g1730 960 ProSitePatterns Serine/Threonine protein kinases active-site signature. 743 755 IPR008271 GO:0004672|GO:0006468
Lal9g1730 960 Gene3D Ribonuclease Inhibitor 28 189 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1730 Lal-Chr9 19497024 19507077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1730 5 960 Receptor kinase-like Gene Family AT5G01950 59.167 0.0 1100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Lal9g1730 Pkinase 4.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1730 - - lang:109325183 1558.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g1730 9 19497024 19507077 Lal1g2325 1 25139011 25145337 LSH