Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1722 ATGGAGAATATTGGATCTAGTAGAAGTTGTATGAAAGCGATTGAAGAGCTAGAGAGAGGAAGAGAATTTGCGAAGCAGCTAAGAGATATGATTGATAGAAATGGAAATGATGATGATGAGGTTGAGAAGGTTGTACAGAAAGTGTTAATGTCCTTCACCAACTCACTCTTTCTCTTCCACAACAATAAGGAAAGAAGAGGCTCTTATAGCAGAAGAAAAAATTCAGAAACACGAGAACATGAATCTGAAACTCCAATAGAAGATGGCCATCAATGGAGAAAGTATGGCCAAAAAGTGATCCTGAATGCCAAATATCCCAGGAACTACTATAGGTGCAGTCACAAATATGATCAAAATTGCGAAGCAACTAAACAAGTACAAAGAGTTAAAGATAACCCTCCCCTTCACAAGACCACATACTATGGCAACCACACTTGCACAAACCCTGCTGACATCATACTTCATGATGATTCCAATTCTCACTCTTCTCTTTTACTTTGCTTTGACAACTCCCTCCCAACATCATTAACAAAACTAGTGAAAAAGGAGTGTAAGGAGGATGATATTACTCCCTCAAATGATTACATCCTCTCTCCTCACCTCACTTTTGATAACAGTTCATCCTCAAAGATTCACTCATCAGATTACATGGATGAAATGTCTTCTCTCTTCTGTCATTCTGCTGAGCTTCATCAATTGCCTTTCACTCCTTTCTTCAATTTTCATGACTAG 732 0.3839 MENIGSSRSCMKAIEELERGREFAKQLRDMIDRNGNDDDEVEKVVQKVLMSFTNSLFLFHNNKERRGSYSRRKNSETREHESETPIEDGHQWRKYGQKVILNAKYPRNYYRCSHKYDQNCEATKQVQRVKDNPPLHKTTYYGNHTCTNPADIILHDDSNSHSSLLLCFDNSLPTSLTKLVKKECKEDDITPSNDYILSPHLTFDNSSSSKIHSSDYMDEMSSLFCHSAELHQLPFTPFFNFHD 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1722 243 Pfam WRKY DNA -binding domain 87 146 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal9g1722 243 Gene3D WRKY domain 71 150 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal9g1722 243 PANTHER WRKY TRANSCRIPTION FACTOR 70-RELATED 11 215 - -
Lal9g1722 243 SMART WRKY_cls 86 148 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal9g1722 243 SUPERFAMILY WRKY DNA-binding domain 83 149 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal9g1722 243 MobiDBLite consensus disorder prediction 66 89 - -
Lal9g1722 243 ProSiteProfiles WRKY domain profile. 81 149 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal9g1722 243 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 11 215 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1722 Lal-Chr9 19443027 19444560 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1722 11 183 WRKY Transcription Factor Family AT3G56400 32.547 9.31e-32 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal9g1722 WRKY 1.8e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1722 - - gmx:100170682 210.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1975 2 21923317 21924826 Lal9g1722 9 19443027 19444560 LSH
Lal9g1722 9 19443027 19444560 Lal19g0006 19 55406 57774 PCT
Lal19g0006 19 55406 57774 Lal9g1722 9 19443027 19444560 PCT