Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1719 ATGGGGTGTTTCACTGTACTGAAGAGCAAGAAGAAAAAGTCTGATCAAACCACGTATGTAAAACGCTTAAGCCATAATGACAATGTACCAACGGTGCTGCCTGAACCTCAAACTCATACTCGCTCACTCCAATCTGCACCTCCTAGTTTTAGGACCAGAGTGAAACCAATTCAACCCGTTAATAAAGTCAATATCAATAGAACACGAGCATTATCTGCTCCATCGACTCTTGATGCAGCAGATCAAGATGCACTGGCCTCGGTTGAGTATGAGGAACAAGAAGAGTCAAAACAACGAACTGGATCAATGAAGGAGCGACGTTCGTCTAGTCCACAACCTTTGCCCCTCCCTTCACCTCAGGGCAGTGTGGCTTTGAAGGCTATGGGCAGCTTTAAGTCTGTGATAGTTAGTGGTCCTCTATCTGCTTCTGGTCCTTTGCCGCTTCCACCTACTGGTTCACTTCGTAACTTTCAGTATGATGAAATCGCTTCTGCTTGCCTTAATTTCTCTTCAGATCGATGCATGTCAGAGTGTCTTTCTTCCACCATATATAAAGCTTCCTTTGGAGATGACGTTTCAAGTTCAAAGAAGTTTGAAGCCACTGTCACGCGTCTTCACCCATCAACTCAGGGGTTGAAGGAATTTATGAACGAGGTTTATACTCTTGCATCTTTGCAACATCCAAACCTCTGTAAATTGCTAGGGTTTCATGCACGTGATGGTTCAGAGCAGAGAATGTTGGTGTATGAAAGGCTATACCATGGAAGCTTGGACCGGTTGTTGTATGGGAGATCTGATGGCCCATCGATTGATTGGAATACAAGAATGAAAATTGCTATGTGTGCTGCACAAGGTCTTACTTTCTTGCATGAGGAAGGGCCTTTTCAGGCAATGTATAATGAGTTTTCAACAGCCAACATACAAATTGACAAAGATTTCAGTGCAAAGCTTTCAGGATATGGTTGTGTTGGGCATATTCCCGAGGAGGAGATTTCAAGCAGTTCTTCAGCTGTTGGAAACCTGTCAATGGAGACTCTGGAAAAAAGAATGCTTACTCCAAAGAGCAATGTATGGAGTTTTGGAATTTTTCTTCTGGAGCTACTTACTGGAAGAAAGAATCTGGACAGTCGTCATCCCAAGGAAGAGAGAAATTTAGTGAAGTGGAGCCGGCCTTTCCTAGCCGATGATTATCGGCTGTCTTTGATAATGGACCCTCAACTTAAAGGTCGCTTTCCATCTAAAGCAGCAAGAACAATAGCTGACATTGCACAAAGATGCCTTCAAAAGGAGCCGTCGGAAAGGCCTACCATGAGAACTGTTGTTAAGCATCTCAAGATGATACAAGATGTGAGGTATTCGTGCCGGTTCCCGTTGCAGGAGCCAGCAGCAATCTCTGGAAAACATATGTCAAGATCACCCAGTCTTAATGGTGTTATCTGCCCTGCACCTAGGTTGAGTTTCTCACCGTCGCCACCATCCATAGCATTAGTTTCGGTTTCACCTCCAAGATGGTCAGGAGTGCCCATGGTTCTTCCTCCAAGAGCTTGTTTGGAGGAACTTGATAGGCAAGAAAGTAGAAAGTCATCATCTTCAGCCCCAAGGAGGGCTAGTGTTGAAGGATTTTGA 1626 0.4446 MGCFTVLKSKKKKSDQTTYVKRLSHNDNVPTVLPEPQTHTRSLQSAPPSFRTRVKPIQPVNKVNINRTRALSAPSTLDAADQDALASVEYEEQEESKQRTGSMKERRSSSPQPLPLPSPQGSVALKAMGSFKSVIVSGPLSASGPLPLPPTGSLRNFQYDEIASACLNFSSDRCMSECLSSTIYKASFGDDVSSSKKFEATVTRLHPSTQGLKEFMNEVYTLASLQHPNLCKLLGFHARDGSEQRMLVYERLYHGSLDRLLYGRSDGPSIDWNTRMKIAMCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHIPEEEISSSSSAVGNLSMETLEKRMLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDYRLSLIMDPQLKGRFPSKAARTIADIAQRCLQKEPSERPTMRTVVKHLKMIQDVRYSCRFPLQEPAAISGKHMSRSPSLNGVICPAPRLSFSPSPPSIALVSVSPPRWSGVPMVLPPRACLEELDRQESRKSSSSAPRRASVEGF 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1719 541 MobiDBLite consensus disorder prediction 25 59 - -
Lal9g1719 541 SUPERFAMILY Protein kinase-like (PK-like) 147 455 IPR011009 -
Lal9g1719 541 Gene3D Transferase(Phosphotransferase) domain 1 252 455 - -
Lal9g1719 541 Gene3D Phosphorylase Kinase; domain 1 150 250 - -
Lal9g1719 541 MobiDBLite consensus disorder prediction 87 122 - -
Lal9g1719 541 ProSiteProfiles Protein kinase domain profile. 169 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g1719 541 PANTHER OS01G0588500 PROTEIN-RELATED 46 540 - -
Lal9g1719 541 MobiDBLite consensus disorder prediction 25 51 - -
Lal9g1719 541 MobiDBLite consensus disorder prediction 90 104 - -
Lal9g1719 541 MobiDBLite consensus disorder prediction 518 541 - -
Lal9g1719 541 Pfam Protein tyrosine and serine/threonine kinase 183 444 IPR001245 GO:0004672|GO:0006468
Lal9g1719 541 PANTHER OS01G0822200 PROTEIN 46 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1719 Lal-Chr9 19421045 19425118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1719 141 450 Receptor kinase-like Gene Family AT4G02010 37.460 2.93e-56 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Lal9g1719 PK_Tyr_Ser-Thr 5.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1719 - - gmx:100808712 927.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g1719 9 19421045 19425118 Lal9g1719 9 19421045 19425118 ECH
Lal2g1962 2 21864635 21869142 Lal9g1719 9 19421045 19425118 LSH
Lal9g1719 9 19421045 19425118 Lal14g0819 14 10281283 10283747 PCT
Lal14g0819 14 10281283 10283747 Lal9g1719 9 19421045 19425118 PCT