Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1717 ATGCCTAATGCATGGTTCTATAAGCTGAGAGACATGGGAAGATCAACAACAACATCTCAGCCCAGAAAGAAAAAACAATATTCTTCAACACCAACCTCATCAACCAAACATTCATCAAAACCAAAACAACAACAACAACAACAACAACACCAATACAATATTCCTAGAAAATCATACCACTTTACAAGAGACCTTAACCTTAACTATAGTCATAACACAAGTGATGATATACTCAACACTTCATCAATAACCCAAAAACCCTTAAACACCACTAATTTCCATGAACCGCTGAGAAAATCAACCAAGCAAAGAGCCATGAGAAGAACTTCAAAAACTTCTTATTCATCATCTCCACTTGAGTTAGAGTTGTATGATCCACAGTTCAGAACAGACAATGTTCTTCTTGCAACAGAATCTTTGTCATTTGTTGATAGGGTTTCGTTGTCAAACAACAACTCTTCTTGTGGATGCACAGTACTACTCTCCAACAACAACAACACCAATAATGATATCATTATAGATGTGGACAACAACTCTATAGCAAGAAAAGATGATAAGCTAGGAGGAGACTGTGATTATCTATTTTCTGAGCTTGTGCTTCCACCAATTGTAACCAAGCCAAGTACTACTAAATTCAATGACTTGCTTAGTGATGATGCAAAAAACAACAACAAAGAAACCAAACCAAGGAGTAGAATGGTGACACATAAAGATCAACAACACAATGTTAAAGAGGAATCCAGATTCACTGAATCCAAGTCCCTTAAAGGGTCTCTTCTTAAAGTTAAAATTGTGAAGGAAGACAATGCATTAATGAAAGAAGTGAGGAATAATTCTGGTGGTGGTAGGAGATTGAGACTTAGGATTAATTCACCAAGAATTAGAAGCCGGAAAAGTGTGTCAACGGCAGCGGTGGCCGGCTTCCGGAGAAGCCTTTCAGATAGCTTTGCAATAGTGAAGTCATCATTCAATCCAGAGAGTGATTTTAGAGAGTCAATGATGGAGATGATTGTGCACAACAACATAAGGAGTTCAAAGGATTTGGAAGATCTTCTAGCTTGTTACCTTTCTCTTAATTCAGATGAGTATCATCACCTCATTATCAAAGTTTTCAAGCAAATTTGGTTTGATTTTATTGATAATCACTAG 1149 0.3681 MPNAWFYKLRDMGRSTTTSQPRKKKQYSSTPTSSTKHSSKPKQQQQQQQHQYNIPRKSYHFTRDLNLNYSHNTSDDILNTSSITQKPLNTTNFHEPLRKSTKQRAMRRTSKTSYSSSPLELELYDPQFRTDNVLLATESLSFVDRVSLSNNNSSCGCTVLLSNNNNTNNDIIIDVDNNSIARKDDKLGGDCDYLFSELVLPPIVTKPSTTKFNDLLSDDAKNNNKETKPRSRMVTHKDQQHNVKEESRFTESKSLKGSLLKVKIVKEDNALMKEVRNNSGGGRRLRLRINSPRIRSRKSVSTAAVAGFRRSLSDSFAIVKSSFNPESDFRESMMEMIVHNNIRSSKDLEDLLACYLSLNSDEYHHLIIKVFKQIWFDFIDNH 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1717 382 MobiDBLite consensus disorder prediction 72 93 - -
Lal9g1717 382 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 2 381 - -
Lal9g1717 382 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 317 377 IPR006458 -
Lal9g1717 382 Pfam Transcriptional repressor, ovate 322 377 IPR006458 -
Lal9g1717 382 MobiDBLite consensus disorder prediction 12 55 - -
Lal9g1717 382 ProSiteProfiles OVATE domain profile. 318 377 IPR006458 -
Lal9g1717 382 MobiDBLite consensus disorder prediction 218 250 - -
Lal9g1717 382 MobiDBLite consensus disorder prediction 215 250 - -
Lal9g1717 382 MobiDBLite consensus disorder prediction 1 55 - -
Lal9g1717 382 Pfam DNA-binding domain 1 39 IPR025830 GO:0003677
Lal9g1717 382 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 2 381 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1717 Lal-Chr9 19403115 19404263 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lal9g1717 Ovate 1.8e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1717 - - lang:109359570 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g1717 9 19403115 19404263 Lal9g1717 9 19403115 19404263 ECH