Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1714 ATGTGCAAAAAGAACCCTAGGTTCTGGGGTGCTGCCACTAAGTTTTTCAGAAGTTCTTTTTCATCAGTATTCTCTAGTGTCATCCCAGAAAACTACGGAATGCTCAAAGATGTGGTTGAAACATATTATAATATTAGCAGTAGCATCAGCCATATGTGGAAATTGTTCCCACAAATGGAACAGAAAGTAAGTGTGCTTATGCAACGATACGAGCTAGGGAGATTATTAGGCCAGGGAACCTTTGCAAAGGTCTACCATGCTAGGAACCTTCTAACTGGCATGAATGTGGCCATCAAGGTAGTTGATAAAGAAAAGGTTTTGAAAGTTGGGATGATTGATCAGATCAAGCGCGAAATTTCGGTGATGAAGCTAGTTAAACATCCAAATGTGGTTGAGCTTTTTGAGGTAATGGCAAGTAAAACCAAGATTTACATTGTCATGGAGTATGCAAAAGGTGGCGAGCTTTTCAACAAAGTAGCGAAAGGAAAGTTAAATGAAGATGTTGCTAGAAAATACTTCCAGCAACTGGTTAGTGCAGTCGATTACTGCCACAGCAGGGGTGCGTGTCACCGAGATTTAAAGCCGGAGAATCTACTATTGGATGAAAATGATAATTTGAAGGTTTCAGATTTCGGTTTCAGTGTACTTGCTGATTCAAAATGCCAAGATGGGTTACTCTACACCACATGTGGTACTCCTTCATATGTTGCTCCTGAAGTGATAAAAAGAAGGGGTTATGATGGAACCAAAGCTGACATATGGTCATGTGGTGTAATCCTTTATGTTCTATTGGCTGGTTTTCTTCCATTCCGTGATGCAAATCTGATGGAGATGTACAAGAAGATTGGTAAAGGGGAATTCAAGTTTCCTAGATGGTTCGCACCGGATGTTCGCCGGCTCTTGTCAAAAATCTTGGATCCTAACCCAATGACCAGGATATCAATGGTGAAACTCATGGAAAGTTCTTGGTTTAAAAGGGGGTTAGTGAAAGAGAAACCAGTTGTAACCAAGATAGAGAAGAAACAAATATCTCCTCTTGATGCTGCTGACGGAGAATTTGAAGTATACGAGAATGGTGATCCTATTACAGACTCAAAGCAAGGACAAACAATGCCTTGTAAATTGAATGCCTTTGATATCATATCTTTCTCAACTGGTTTCGATTTGTCTGGTTTGTTTGAGGATGATGTTCATAAGAAAGAGGTGCGGTTTACATCCTACAAGCCCGCATCGATTATTATCTCGAAATTGGAGGAGATTTGTGATGGACTTCGGTTGAAAATAAAGAAGAAAGATGGAGGTTTATTGAAGTTGGAAGGTTCCAATAAAGGGAGGAAAGGTGCTTTGGGTATTGATGCTGAGATATTTGAGATTACACCAGAATTCCATCTGGTGGAGTTTAAGAAGTGCAATGGTGATACAATGGAGTACCAGAAGCTGTTGAAACAAGACATTAGACCAGCACTTAAGGACATTGTTTGGACTTGGCAAAGAGAACAACAACCTCAGCAACAACTCCAACATGAAGCAGTAGTGCAAGAAGAGCAGATAGATGCTGTAGCACAGCAAATTTCATAG 1578 0.403 MCKKNPRFWGAATKFFRSSFSSVFSSVIPENYGMLKDVVETYYNISSSISHMWKLFPQMEQKVSVLMQRYELGRLLGQGTFAKVYHARNLLTGMNVAIKVVDKEKVLKVGMIDQIKREISVMKLVKHPNVVELFEVMASKTKIYIVMEYAKGGELFNKVAKGKLNEDVARKYFQQLVSAVDYCHSRGACHRDLKPENLLLDENDNLKVSDFGFSVLADSKCQDGLLYTTCGTPSYVAPEVIKRRGYDGTKADIWSCGVILYVLLAGFLPFRDANLMEMYKKIGKGEFKFPRWFAPDVRRLLSKILDPNPMTRISMVKLMESSWFKRGLVKEKPVVTKIEKKQISPLDAADGEFEVYENGDPITDSKQGQTMPCKLNAFDIISFSTGFDLSGLFEDDVHKKEVRFTSYKPASIIISKLEEICDGLRLKIKKKDGGLLKLEGSNKGRKGALGIDAEIFEITPEFHLVEFKKCNGDTMEYQKLLKQDIRPALKDIVWTWQREQQPQQQLQHEAVVQEEQIDAVAQQIS 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1714 525 SMART serkin_6 70 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g1714 525 ProSiteProfiles Protein kinase domain profile. 70 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g1714 525 Gene3D Kinase associated domain 1, KA1 371 495 - -
Lal9g1714 525 Gene3D Transferase(Phosphotransferase) domain 1 60 370 - -
Lal9g1714 525 SUPERFAMILY KA1-like 401 483 IPR028375 -
Lal9g1714 525 SUPERFAMILY Protein kinase-like (PK-like) 45 331 IPR011009 -
Lal9g1714 525 ProSiteProfiles NAF domain profile. 370 394 IPR018451 GO:0007165
Lal9g1714 525 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Lal9g1714 525 Coils Coil 503 523 - -
Lal9g1714 525 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 10 60 506 - -
Lal9g1714 525 CDD CIPK_C 376 490 - -
Lal9g1714 525 CDD STKc_SnRK3 69 323 - -
Lal9g1714 525 Pfam NAF domain 372 430 IPR004041 GO:0007165
Lal9g1714 525 PANTHER - 60 506 - -
Lal9g1714 525 Pfam Protein kinase domain 70 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1714 Lal-Chr9 19385994 19388894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1714 59 502 CBL-interacting serine-threonine protein kinases AT5G58380 63.895 0.0 606
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lal9g1714 Pkinase 3.8e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1714 K07198 - gmx:100803787 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g1714 9 19385994 19388894 Lal4g1598 4 20158107 20160049 ECH
Lal9g1714 9 19385994 19388894 Lal9g1714 9 19385994 19388894 ECH
Lal9g1714 9 19385994 19388894 Lal18g1274 18 15353647 15355364 ECH
Lal9g1714 9 19385994 19388894 Lal5g1279 5 15489781 15491109 ECH
Lal9g1714 9 19385994 19388894 Lal3g0417 3 2892213 2893556 ECH