Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1702 ATGGGAGGGTGTTGTAGCCATGATGTTGCTGTTAGAGGAAAGATGGAAATGGAGGTAGATGATGGAGAATATGAACATGATCATAGTACTCATGTTACATATGAATGTGATGAAGCAAGGGTCATATTAAAAGGATCCTCTATGTTTGTATCAATGTCTAGCCAGCAGGGTAAGAAAGGTGTCAATCAAGATGCAATGACAGTTTGGGAGGAGTTCACAGGAGAAGAAGATATGATATTTTGTGGTGTGTTCGATGGTCATGGTCCTTTAGGGCACAAGGTTTCACAATACATCCGTGACAATCTACCCTTAAAACTGTCTGCAGCAATCAGAATTGCACAACAAAAAGCATGCAGATTTTATGATGCTAATGAGTCAGAAAGTGGAAGTTGTTATGATGATATATATGATGAGAATAACATAGGCATGTCCCTTGCTGCATGGGAGGGATGTTTTCTCAAGTCCTTTGATGAAATGGATGAACAGCTTGCTCAAGAGATTAATATTGACACCTATTGCAGTGGTAGCACTGCTGTAACTGTGGTTAAACAGGTCATAAGACAAACAATCTTACCGTTAGTTGAGGCTCATCCTCTAGATCTTTACCTCCAACAACACCTTATAGATTATTTGTTCACACTATTCGAGTATCGGGAAGCTTTCAGCTTAGGGAAATACTTAGGAGTTTCTATCACAAGGAAGACTCCATCTAAGAAAGGTTTACAACATTATGGTGTCGGTGACCAGCTGATAATTGGCAATGTAGGTGATTCTCGTGCAGTTCTTTGCACAAGAGGGGACAGAGATCAACTTATTCCAGTTCAACTAACTGTTGACTTGAAACCTGATATTCCAATTGAAGCTTCAAGAATCATTAGTTGTGATGGTAGAGTTTTCGCAGCCGAAGAAGAACCGGATGTATACAGAATATGGATGCCTGATGATGATTGCCCTGGACTAGCCATGTCAAGAGCCTTTGGAGACTTTTGCCTAAAAGATTATGGTCTCATCTCAGTTCCTGATGTCTTTTACAGAAAACTTACAAAACAAGATGAATTTGTAGTTTTGGCAACCGATGGGGTATGGGATGTGCTTAGCAACAATGAAGTAATAAACATAGTTGGTTCAGCACCAAGGAGGTCCATAGCAGCAAAAATGCTAGTAAAGCGCGCTGTTCGAGCCTGGAGATACAAGTATCCTGGTTCCAAGGTTGATGATTGTGCAGTCATATGCTTGTTTTTGGATGATCAACCTGTGTTATCACAATCCAAATCCAATAAGGGTGGAAGCCACAGAATCCATAGAAATCAAAGCAATAAGCACCTGTATCGTCGCTCGAAATCAACTAGAAATGAAGACACTGAAACTGTTGATGGCAAAGTTGATTTAGAATTGAATGAAGAATGGAAAGCTCTTGGAGGATTAGTTAGATCTAACTCAATATCAAAACTTCCTCGGCTTGCTAAGAATATGAGTAAAAGACAAGCATCTAAGTACTATAAGGGGAGTTAG 1512 0.3988 MGGCCSHDVAVRGKMEMEVDDGEYEHDHSTHVTYECDEARVILKGSSMFVSMSSQQGKKGVNQDAMTVWEEFTGEEDMIFCGVFDGHGPLGHKVSQYIRDNLPLKLSAAIRIAQQKACRFYDANESESGSCYDDIYDENNIGMSLAAWEGCFLKSFDEMDEQLAQEINIDTYCSGSTAVTVVKQVIRQTILPLVEAHPLDLYLQQHLIDYLFTLFEYREAFSLGKYLGVSITRKTPSKKGLQHYGVGDQLIIGNVGDSRAVLCTRGDRDQLIPVQLTVDLKPDIPIEASRIISCDGRVFAAEEEPDVYRIWMPDDDCPGLAMSRAFGDFCLKDYGLISVPDVFYRKLTKQDEFVVLATDGVWDVLSNNEVINIVGSAPRRSIAAKMLVKRAVRAWRYKYPGSKVDDCAVICLFLDDQPVLSQSKSNKGGSHRIHRNQSNKHLYRRSKSTRNEDTETVDGKVDLELNEEWKALGGLVRSNSISKLPRLAKNMSKRQASKYYKGS 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1702 503 SMART PP2C_4 39 412 IPR001932 -
Lal9g1702 503 MobiDBLite consensus disorder prediction 428 444 - -
Lal9g1702 503 ProSiteProfiles PPM-type phosphatase domain profile. 49 414 IPR001932 -
Lal9g1702 503 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 1 184 - -
Lal9g1702 503 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 247 476 - -
Lal9g1702 503 Gene3D - 35 416 IPR036457 -
Lal9g1702 503 Pfam Protein phosphatase 2C 246 397 IPR001932 -
Lal9g1702 503 SUPERFAMILY PP2C-like 39 416 IPR036457 -
Lal9g1702 503 MobiDBLite consensus disorder prediction 422 456 - -
Lal9g1702 503 CDD PP2Cc 48 414 IPR001932 -
Lal9g1702 503 PANTHER ALPHABET, ISOFORM E-RELATED 1 184 - -
Lal9g1702 503 PANTHER ALPHABET, ISOFORM E-RELATED 247 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1702 Lal-Chr9 19275789 19279850 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1702 1 443 PP2C-type Phosphatase Gene Family AT5G01700 44.595 1.52e-117 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1702 - - mnt:21397155 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g1702 9 19275789 19279850 Lal9g1702 9 19275789 19279850 ECH
Lal2g1946 2 21719604 21722760 Lal9g1702 9 19275789 19279850 LSH
Lal9g1702 9 19275789 19279850 Lal1g2275 1 24692910 24696018 LSH