Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1686 ATGCCCATAATGCCTTCAACAATTCTTTTTAGCTTCCTCCTATTTTTCACTCTCTTTCATGCCAATGCTTTTGTCTTTGAAGGATTTCATAATAATAGTAAACTCATCCTTAATGGAACTTCCATTATCAAAACAAGTTCATTACTTAGGCTCACCAACACATCAACCAATATTATAGGCCATGCATTTTATGCTAATCCTTTCCAAATGATTAATACAACAAATTCTTCTCTCCAACCAAACCCTAGTTATTCTTTTAGCACTTCTTTTGTTTTCTCAATTGTATCACCAAGTTCTGGCTCTGGTGGCTTTGGTCTTGCCTTCACCATAGCACCTTCAACAGATTTTCAAGGAGCTGAGGCAGGTAACTTTCTTGGTCTAGTTAACTCAAGCAATAATGGGAATGTTTCAAATCACATCTTTGCAGTTGAGTTTGACACAGTAAATGTCTATAATGGTGACTCAGACACTGAAGGAAACCATGTTGGTGTTAATGTAAATGGTGTGTCCTCAATTTTTAGTGAACCTGCTGCATATTTTGAAGGAAGAAATGGTTATGTAAAAGAAGAGTTTAGCATGGAAAAGGTTGATGCTGTTCAAGCTTGGATAGAATATGATGGTGAAAATAAAATTGTGAATGTAACAGTAGCTCCTTTGTCATCAAAAAAACCAACCAAACCACTTATATCTAACAATATTGACCTCAACAATGTTCTTAAGGAAAACATGTTTGTTGGTTTTTCAGCATCAACAGGCCAAGAAGCAAGTTCTCACTATATCTTGGGGTGGAGTTTTGCAATGAATGGAATTGCTCCTTCACTCAATATTTCTCAGCTTCCAAAGCCACCTTCAAAGTTGGAAGATTTTTCATCTTTTCCTTGGGTCAAGGTTGCAATTTCCATTTTGTCTGCTTTGACTGTTACCTTGTTATGTCTTTTACTTTTTCAAACATTGTACAAGAGATACACTAACTTTGAGGCTCTTGAAGAATGGGAACTAGATTGTCCTCACAGATTCAGATACAAAGATCTTCACATAGCAACAAAGGGATTCAAAGAGAGTGAGTTACTTGGAGTTGGAGGCTTTGGTGCTGTATACAAAGGTGTGTTACCAACTACAGGAATTGAGGTTGCTGTTAAGAAGATTTTGAGAAGCCATGCTCATGGTATGAGAGAATTTGCTGCAGAAATTGAAAGTTTAGGAAAGTTGAGGCATAAAAATTTGGTGAATCTTCAAGGTTGGTGCAAGAAAAAGAATGAACTACTCTTAGTCTATGATCTCATCCCAAATGGAAGCCTTGATTCAATCCTATATGATCCTAACAACAACTTTGTTTTGGATTGGGACCAAAGATTCAACATAATCAAAGGCATCACACAAGGACTATTGTATCTACATGAAGAATGGGAACAAGTGGTGATCCACAGAGATGTAAAATCTAGCAACATTCTAATAGACCTCGATTTGAATGCTCGTTTAGGCGATTTTGGATTGGCGCGACTCTATAATCACGATCAAGTATCACACACAACAAATGTAGTTGGCACTATTGGTTACATTGCACCGGAATTAACTCGAACCGGAAAGGTATCTACAAAATCTGATGTGTATGCATATGGTGTTCTACTCCTTGAAATTGTTACCGGGAAGAGACCTAGTGATTTGGATCAATTTTTCTTGGTGGATTGGGTTATTGAAAATTACCATCTTGGTCAAGTTCTTGAAGTGGTTGATCCTAAGATGAATTTAGCTTATGATGAGGAAGAAGTTGAGTTGGTTTTGAAGTTAGGTCTGTTATGTTCTCATCACAAAGCTGAGTATAGACCTAGTATGAAAGAAGTGACAAGGTACTTAAACTTTGATGAACTTGTTCCTAATATTGCTGATTGGACACATGATGTTTCTGAGAGTAGTAGATTAAGCTCAGGTTTCTTACAATTCATGTCTACTAGTACTATTTCAGCATCAAATATTTTATCCTCCACTGGCATGAGTACAATGTCTATAGAAGATGGTAGATAG 2022 0.3675 MPIMPSTILFSFLLFFTLFHANAFVFEGFHNNSKLILNGTSIIKTSSLLRLTNTSTNIIGHAFYANPFQMINTTNSSLQPNPSYSFSTSFVFSIVSPSSGSGGFGLAFTIAPSTDFQGAEAGNFLGLVNSSNNGNVSNHIFAVEFDTVNVYNGDSDTEGNHVGVNVNGVSSIFSEPAAYFEGRNGYVKEEFSMEKVDAVQAWIEYDGENKIVNVTVAPLSSKKPTKPLISNNIDLNNVLKENMFVGFSASTGQEASSHYILGWSFAMNGIAPSLNISQLPKPPSKLEDFSSFPWVKVAISILSALTVTLLCLLLFQTLYKRYTNFEALEEWELDCPHRFRYKDLHIATKGFKESELLGVGGFGAVYKGVLPTTGIEVAVKKILRSHAHGMREFAAEIESLGKLRHKNLVNLQGWCKKKNELLLVYDLIPNGSLDSILYDPNNNFVLDWDQRFNIIKGITQGLLYLHEEWEQVVIHRDVKSSNILIDLDLNARLGDFGLARLYNHDQVSHTTNVVGTIGYIAPELTRTGKVSTKSDVYAYGVLLLEIVTGKRPSDLDQFFLVDWVIENYHLGQVLEVVDPKMNLAYDEEEVELVLKLGLLCSHHKAEYRPSMKEVTRYLNFDELVPNIADWTHDVSESSRLSSGFLQFMSTSTISASNILSSTGMSTMSIEDGR 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1686 673 ProSitePatterns Protein kinases ATP-binding region signature. 357 381 IPR017441 GO:0005524
Lal9g1686 673 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 284 IPR013320 -
Lal9g1686 673 CDD STKc_IRAK 357 619 - -
Lal9g1686 673 Pfam Legume lectin domain 22 280 IPR001220 GO:0030246
Lal9g1686 673 Gene3D Phosphorylase Kinase; domain 1 336 427 - -
Lal9g1686 673 ProSiteProfiles Protein kinase domain profile. 351 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g1686 673 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VI.1-RELATED 12 648 - -
Lal9g1686 673 CDD lectin_legume_LecRK_Arcelin_ConA 24 269 IPR001220 GO:0030246
Lal9g1686 673 Pfam Protein kinase domain 351 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g1686 673 Gene3D - 21 275 - -
Lal9g1686 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Lal9g1686 673 PANTHER - 12 648 - -
Lal9g1686 673 Gene3D Transferase(Phosphotransferase) domain 1 428 626 - -
Lal9g1686 673 SMART serkin_6 351 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g1686 673 SUPERFAMILY Protein kinase-like (PK-like) 335 649 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1686 Lal-Chr9 19162468 19164489 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1686 24 673 Receptor kinase-like Gene Family AT5G01560 48.503 0.0 614
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lal9g1686 Pkinase 1.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1686 - - gmx:100802724 920.228
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g1686 9 19162468 19164489 Lal9g1686 9 19162468 19164489 ECH