Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1679 ATGAGTGATTGTTGTGTAAAATCCAAGAGCAAAGTATTCCAAATAACCCTCTATGTGTTTCTTCTTCTATGCTTGAACTATGCAATAGCAACTACAACTAACAATGATCTCAAAGCCTTACATGACTTCAAGAGTCATATAGTTAAAGATCCATTCCATTTTATGAATCTATGGAATGATTCCATTCATCACTGCAACTGGACAGGAATCACATGCAATATGTTCAATGGAAGAGTAATATATATGAATCTCTCATCACAAGGATTGTCAGGGATTGTTACACAATCTATAGAAAACATCACATTTCTCACAAGAATCAACCTATCTTACAATACTTTCTATGGTGAATTTCCTCAAAAGGTAGGACATTTATTGAACCTACAAGAGCTATATATCAATAACAACAACTTCAGTGGGAACATTCCAAGTAATCTAAGTCACTGTAGAGAACTAATAGCATTGGATGCTGGTCAAAACAATCTCACAGGAACAATACCAACTTGGATAGGAAATTTAACTTCTTTAGTTAATTTATTCTTGTCCAGAAACAATTTGCATGGGAATATACCATATGAGGTAGGTAGTTTATCAAACTTGAGATTTCTTGGGTTATCTTTGAATTACTTGTCTGGCAAGGTTCCTTCTTCGATTTATAATATTACTTCAATGACTCATTTTGCTGTTGCTGGAAACCATCTCTATGGTGACATACCAGATGGTGTTGGATTTACTCTTCCTAACCTTGAAGCATTTCTTTGCGAGTCGAACAATTTCACGGGGTCAATTCCTAGATCGTTGGTAAATGCATCAAAACTAGAAATTCTTGGCTTTGGTATAAATGGCCTCACGGGCAGAGTTCCTGATAACCTAGGGCTTTTGCGCCGACTAAGCTACCTTAATTTTCAAGAAAATCGTCTTGGAAGTGGGAGAGCCGGCGACCTTAGCTTTCTCGATTCTTTGGTCAACTGCACTGTCCTAGAATTTCTTGGTCTGCATTTTAACAGTTTTGGAGGAGAGTTACCCATCTCAATTGCTAATTTGTCAATCCAATTGAACACATTTAACATAGGTTCCAATAGAATACATGGAAACATACCTGCTGGTATTGGCAATCTTGAAAACTTGGCCTCCCTAGCATTGGAACGTAACAACCTAACCGGTAGTATTCCGGATAGTTTAGGTATGCTGCAAAATCTGCAAGTATTGTTTTTGGGTGATAACCATTTTTCAGGAAGAATCCCATTCTCCATAGGAAATTTATCTTCATTAACAAAACTCTATATGGAGTTGAACTACTTTGAAGGGAGTATACCTTCTAGTCTTGGAAATTGCCACAAGTTATTACTACTTGGACTTCATAGAAACAAACTTACAGGCACAATACCGAAAGAAGTGATTGGCCTTTCTTCACTTGCAGACTACTTCGATGTGTCTAATAATAGTTTGTCAGGGACTTTGCCAACAGAAGTCGGTAAACTAGTTCATCTCGGATTTTTGGATTTGTCAGAAAACAAATTCTCTGGAGTCATTCCATCCTCATTGGGTAGCTGCACTAGTTTGTTAACACTATATTTGCAGGGTAACTATTTCGACGGAAACATTCCTCGAACGTTACAGAACCTGAGAGCCTTAGACGACCTTGATCTTTCACGCAATAACTTGTCCGGTAAGATTCCCAAATTTCTTGGTGATTTCAAACTGCTCCAGCATCTCAATCTTTCCAACAATGACCTCGATGGAGATATACCAACTAATGGAATCTTCAAGAAGAATGCAACCGCGATAGCAATATATGGAAATAACAAACTCTGTGGTGGTGTCCGAGAATTAAACTTACCTGCATGCACTATCAGGAAGGCCTCTATGCTAAGAAAATTTCTAGCCCCAAAGGTAGCTATTCCTGCAATTATTGCATTTGTTATTCTACTCTCTGCATCATGTTTTCTTGCAATCTTTATGGTAAAAAGAGAAAGAAAGAAAACTTCGAGAACGGAGGATTTGGAATTGGCAATTTCTTACTCAACAATAGCAAAGTGCACTGGCGGGTTCGCTCAGGAAAACCTCATTGGCTCAGGAAGTTTTGGTTCTGTTTACAAAGGGATCCTTCCAAATGATGGACCAACTATTGCTATTAAAGTCTTAAATCTTGAACAAAGAGGAGCTTCAAGGAGCTTCATTGGTGAATGCCAAGTCCTAAGAAATATACGACACCGCAACCTTCTCAAGATCATAACTGCAATCTCAAGTATTGATCATCAAGGTAATGACTTTAAAGCTTTGGTCTTTGAGTTCATGCCAAATAGAAGTCTAGAAGAATGGTTACATCCTATAAATAATGTGCAATATCATACCAACACATTGACATTTATTCAAAGATTGAACATAGCAATTGATGTTTCTTCTGCACTTGAATATCTCCACCAATCTTGTCAAACTGCAATTGTTCATTGTGATATAAAACCAAGCAATGTACTTTTGGATAATGATATGGTAGCCCATGTTGGTGACTTTGGATTAGCTACATTTCTACTTGAAGAATCAAGCAATTCTTCCATGCACTCTATTATGTCTTCTACCCTAAAGGGTTCTATTGGATACATCCCTCCAGAGTATGGCATGGGTGTAAAGCCTTCTGTAGTAGGAGATATATACAGCTATGGGATACTATTACTGGAGATTTTCACAGGAAAAAGACCAACTGATGAGGCATTTGAAGGTGGCATTGGAATTCAACAATTTATAGAAAGAGCTTTACCCAACCATGTAATGGAAATAGTTGATCCTTCCATGTTCTCTCAACAAGAATCTGATGAAGGAGAAGAAAATGCTATAAGGAGGGAGTTCTACAATGAAACTGTGATGAAGGATTGCATTGTTTCTGTTATGCAGATTGGATTGTCTTGCTCTGCAACTTCACCAAGTGATCGAATGCATATCGCCGATGTCGTCAAAACACTAAATGCTATCAAGAAGTCTTTCATAAGGATACAGCAAAATGCACTGTGA 3006 0.3772 MSDCCVKSKSKVFQITLYVFLLLCLNYAIATTTNNDLKALHDFKSHIVKDPFHFMNLWNDSIHHCNWTGITCNMFNGRVIYMNLSSQGLSGIVTQSIENITFLTRINLSYNTFYGEFPQKVGHLLNLQELYINNNNFSGNIPSNLSHCRELIALDAGQNNLTGTIPTWIGNLTSLVNLFLSRNNLHGNIPYEVGSLSNLRFLGLSLNYLSGKVPSSIYNITSMTHFAVAGNHLYGDIPDGVGFTLPNLEAFLCESNNFTGSIPRSLVNASKLEILGFGINGLTGRVPDNLGLLRRLSYLNFQENRLGSGRAGDLSFLDSLVNCTVLEFLGLHFNSFGGELPISIANLSIQLNTFNIGSNRIHGNIPAGIGNLENLASLALERNNLTGSIPDSLGMLQNLQVLFLGDNHFSGRIPFSIGNLSSLTKLYMELNYFEGSIPSSLGNCHKLLLLGLHRNKLTGTIPKEVIGLSSLADYFDVSNNSLSGTLPTEVGKLVHLGFLDLSENKFSGVIPSSLGSCTSLLTLYLQGNYFDGNIPRTLQNLRALDDLDLSRNNLSGKIPKFLGDFKLLQHLNLSNNDLDGDIPTNGIFKKNATAIAIYGNNKLCGGVRELNLPACTIRKASMLRKFLAPKVAIPAIIAFVILLSASCFLAIFMVKRERKKTSRTEDLELAISYSTIAKCTGGFAQENLIGSGSFGSVYKGILPNDGPTIAIKVLNLEQRGASRSFIGECQVLRNIRHRNLLKIITAISSIDHQGNDFKALVFEFMPNRSLEEWLHPINNVQYHTNTLTFIQRLNIAIDVSSALEYLHQSCQTAIVHCDIKPSNVLLDNDMVAHVGDFGLATFLLEESSNSSMHSIMSSTLKGSIGYIPPEYGMGVKPSVVGDIYSYGILLLEIFTGKRPTDEAFEGGIGIQQFIERALPNHVMEIVDPSMFSQQESDEGEENAIRREFYNETVMKDCIVSVMQIGLSCSATSPSDRMHIADVVKTLNAIKKSFIRIQQNAL 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1679 1001 SMART serkin_6 683 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g1679 1001 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE, PUTATIVE-RELATED 33 990 - -
Lal9g1679 1001 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 33 990 - -
Lal9g1679 1001 Gene3D Ribonuclease Inhibitor 35 147 IPR032675 -
Lal9g1679 1001 Gene3D Ribonuclease Inhibitor 243 313 IPR032675 -
Lal9g1679 1001 SUPERFAMILY L domain-like 32 307 - -
Lal9g1679 1001 SMART LRR_typ_2 541 564 IPR003591 -
Lal9g1679 1001 SMART LRR_typ_2 372 395 IPR003591 -
Lal9g1679 1001 SMART LRR_typ_2 124 148 IPR003591 -
Lal9g1679 1001 SMART LRR_typ_2 493 517 IPR003591 -
Lal9g1679 1001 SMART LRR_typ_2 172 196 IPR003591 -
Lal9g1679 1001 SMART LRR_typ_2 565 590 IPR003591 -
Lal9g1679 1001 SMART LRR_typ_2 396 420 IPR003591 -
Lal9g1679 1001 Pfam Protein kinase domain 684 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g1679 1001 Gene3D Ribonuclease Inhibitor 314 616 IPR032675 -
Lal9g1679 1001 Pfam Leucine rich repeat 519 578 IPR001611 GO:0005515
Lal9g1679 1001 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
Lal9g1679 1001 SUPERFAMILY L domain-like 350 605 - -
Lal9g1679 1001 SUPERFAMILY Protein kinase-like (PK-like) 667 986 IPR011009 -
Lal9g1679 1001 Gene3D Ribonuclease Inhibitor 148 242 IPR032675 -
Lal9g1679 1001 ProSitePatterns Serine/Threonine protein kinases active-site signature. 814 826 IPR008271 GO:0004672|GO:0006468
Lal9g1679 1001 Gene3D Phosphorylase Kinase; domain 1 646 764 - -
Lal9g1679 1001 ProSitePatterns Protein kinases ATP-binding region signature. 689 712 IPR017441 GO:0005524
Lal9g1679 1001 Gene3D Transferase(Phosphotransferase) domain 1 765 999 - -
Lal9g1679 1001 ProSiteProfiles Protein kinase domain profile. 683 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1679 Lal-Chr9 19073280 19077071 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1679 32 998 Receptor kinase-like Gene Family AT3G47570 43.071 0.0 773
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lal9g1679 Pkinase 6.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1679 - - gmx:106794146 1226.08