Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1664 ATGGAAGTTAAAAGAAAGAGAGAGAGAGAGAGAGAAATGGGTGTAGACTACTACAAGGTTCTTCAGGTAGATAGAAGCGCCAGCGATGATGATCTTAAGAAAGCATATCGAAAGCTTGCAATGAAGTGGCATCCTGATAAGAACCCTAACAACAAGAAAGATGCTGAAGCCAAGTTCAAGCAAATCTCTGAAGCCTATGATGTTTTGAGTGATCCACAAAAGCGAGCTGTGTACGATCAGTATGGTGAGGAGGGGCTGATGGGGCAGGTGCCACCACCGGGAGCCGGGGGTTTTCCTGGTGGGAGCAATGGCAGTCAGGCATCTTTCCGGTTCAACCCCAGAAGTGCAGATGATATATTTTCAGAGTTTTTCGGGTTCTCCAGTCCCTTTGGTGGGATGGGAGATATGGGTAGCCGTGCTGGCCCCTCTGGCTTTTCTAGGGGAGGCGTGTTTGGAGATGATATCTTTGCCCAATTTAGGGGTGGTGCTGGAGATGGATCTGGGCATATGCCTAGGAAAGGTGCAGCCATAGAGAGAGCACTTCTGTGTAGTTTGGAAGATTTGTATAAAGGGGTTACCAAGAAAATGAAGATTTCAAGGGATGTTATTGATAGCAGTGGGAGGCCCACCACGGTAGAGGAAATTCTTTCAATTGTGATCAAACCGGGTTGGAAGAAGGGAACAAAGATAACTTTTCCAGAGAAAGGAAATGAACAGAGAGGTGTTATACCTGCAGACCTTGTCTTCATTATTGATGAAAAGCCCCACACCCTCTTTAAGAGGGATGGCAATGATCTTGTTGTCACACAAAAGACATCTCTTGTAGAAGCCTTAACAGGTTACACAGCCCAACTGACAACCCTTGATGGACGAAATCTTACTATTCCCATAAACTCTATCATTAGTCCAACATATGAAGAAGTTGTTAATGGGGAGGGCATGCCCATTCCTAAAGATCCTTCCAAGAGGGGGAACTTGAGAATCAAATTCAATATCAAGTTTCCTTCCAGGCTTACGTCAGAGCAGAAAAGTGGGATTAAGCGATTATTGACTTCTCCATGA 1062 0.452 MEVKRKREREREMGVDYYKVLQVDRSASDDDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLMGQVPPPGAGGFPGGSNGSQASFRFNPRSADDIFSEFFGFSSPFGGMGDMGSRAGPSGFSRGGVFGDDIFAQFRGGAGDGSGHMPRKGAAIERALLCSLEDLYKGVTKKMKISRDVIDSSGRPTTVEEILSIVIKPGWKKGTKITFPEKGNEQRGVIPADLVFIIDEKPHTLFKRDGNDLVVTQKTSLVEALTGYTAQLTTLDGRNLTIPINSIISPTYEEVVNGEGMPIPKDPSKRGNLRIKFNIKFPSRLTSEQKSGIKRLLTSP 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1664 353 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 13 352 - -
Lal9g1664 353 SUPERFAMILY Chaperone J-domain 15 106 IPR036869 -
Lal9g1664 353 Pfam DnaJ C terminal domain 178 335 IPR002939 -
Lal9g1664 353 CDD DnaJ 16 71 IPR001623 -
Lal9g1664 353 ProSitePatterns Nt-dnaJ domain signature. 59 78 IPR018253 -
Lal9g1664 353 Pfam DnaJ domain 16 79 IPR001623 -
Lal9g1664 353 Gene3D - 256 336 - -
Lal9g1664 353 PANTHER BNAANNG28460D PROTEIN 13 352 - -
Lal9g1664 353 CDD DnaJ_C 177 338 - -
Lal9g1664 353 Gene3D DnaJ domain 15 136 IPR036869 -
Lal9g1664 353 ProSiteProfiles dnaJ domain profile. 16 82 IPR001623 -
Lal9g1664 353 SMART dnaj_3 15 74 IPR001623 -
Lal9g1664 353 Gene3D - 175 254 - -
Lal9g1664 353 SUPERFAMILY HSP40/DnaJ peptide-binding domain 179 256 IPR008971 GO:0006457|GO:0051082
Lal9g1664 353 SUPERFAMILY HSP40/DnaJ peptide-binding domain 259 344 IPR008971 GO:0006457|GO:0051082
Lal9g1664 353 PRINTS DnaJ domain signature 18 36 IPR001623 -
Lal9g1664 353 PRINTS DnaJ domain signature 36 51 IPR001623 -
Lal9g1664 353 PRINTS DnaJ domain signature 54 74 IPR001623 -
Lal9g1664 353 PRINTS DnaJ domain signature 74 93 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1664 Lal-Chr9 18952650 18956586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1664 17 81 C2H2 Transcription Factor Family AT1G74250 39.130 6.63e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1664 K09510 - gmx:100818358 572.392