Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1661 ATGGGTAACTGTTGCAGATCCCCCGCCGCGGTGGCTCGCGAAGACGTCAAATCCACCGATCACACCAAACCCTCAGCCGCCACAACTAAGAAGAAACATACAACTCCGATCACCGTCATCACCGCCGTCCCCAGCTCCAACATCGACGACAAGTACCTGGTGGACCGCGAGCTCGGCCGCGGCGAATTCGGTGTCACATACCTCTGCATCGACCGCGGCACTCGGGAGCTCCTCGCTTGCAAGTCAATCTCCAAGCGGAAGCTCCGGACTGCAATCGATGTGGAGGATGTCCGGCGGGAGGTGGCTATTATGCGTCACCTCCCGGAGTCTCGGAGCATCGTCGCGTTCCGCGAGGCGTGTGAAGATGACAATGCGGTTCACCTAGTGATGGAGCTGTGTGAGGGTGGGGAGCTTTTTGATAGGATTGTGGCGAGGGGGCATTATACGGAGCGGGCTGCAGCGGCGGTGACAAGGACGATTGTGGAGGTTGTGCAGCTATGTCATAAGCATGGAGTGATTCATAGAGACTTGAAACCGGAGAATTTCTTGTTTGCAAATAAGAAGGAGAATTCACCTCTCAAGGCTATTGATTTTGGACTCTCTATATTCTTCAAGCCAGTCGCAATTGCGGTAACGATTGTTGTTACTGCGATTGTGGTCATTGCGGCCGTTGCGATGCAAATTGCAACCACTGCGGTTGAGCATATACCATCTCTTGCTGGTGAGAGGTTCTCAGAAATTGTTGGAAGTCCATATTATATGGCTCCCGAGGTGCTTAAGCGAAACTACGGGCCAGAAATAGATATATGGAGTGCGGGAGTGATTCTCTATATCTTACTGTGTGGTGTTCCCCCATTTTGGGCTGAATCTGAACAAGGGGTTGCACAGGCCATTCTTCGAGGGCTTATAGATTTCAAACGGGAACCTTGGCCCAGTATTTCTGAAAGTGCTAAAAGTCTTGTTAAGCAAATGTTAGAACCTGACCCTAAGCTTCGATTAACTGCCAAACAAGTGATCGAGCATCCTTGGCTCCAAAATGCTAAGAAGGCTCCCAATGTTCCTCTTGGAGATGTTGTCAAGTCAAGGCTTAAGCAGTTTTCGATGATGAATAGATTCAAAAGAAAAGCACTTAGGGTCATTGCTGATTTCTTATCCACTGAAGAAGTTGAAGACATCAAAGATATGTTCAAGAAGATGGATAGCGATAATGATGGTATAGTTTCCATCGAAGAACTAAAAGCTGGATTCCAAAATTTTGAATCCCAACTTACTGAGTCTGATGTAAAGATGCTGTTAGAAGCTATAGATGGTAATGGGAGGGGAACACTTGAATACGGAGAATTTGTCGCTGTTTTCCTTCATGTGAAAAGGATGGCTAATGATGAGCATCTTCGCAAGGCCTTCTCCTATTTTGACAAGGATGCAAATGGATATATTGAACCAGATGAGCTAAGGAATGCATTGATGGAAGATGGAGCAGAAGATTGTACAGATGTAGCGAATGACATTTTCCAAGAAGTAGATACAGACAAGGATGGACGTATCAGCTATGAGGAATTTGTGGCTATGATGAAAACTGGAACAGATTGGAGAAAAGCATCTAGGCATTACTCACGAGGAAGATTCAACAGCTTAAGCTTGAAGTTGATGAAAGATGGTTCTTTAAACTTAGGAGCTGAGTAG 1683 0.4664 MGNCCRSPAAVAREDVKSTDHTKPSAATTKKKHTTPITVITAVPSSNIDDKYLVDRELGRGEFGVTYLCIDRGTRELLACKSISKRKLRTAIDVEDVRREVAIMRHLPESRSIVAFREACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPVAIAVTIVVTAIVVIAAVAMQIATTAVEHIPSLAGERFSEIVGSPYYMAPEVLKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKREPWPSISESAKSLVKQMLEPDPKLRLTAKQVIEHPWLQNAKKAPNVPLGDVVKSRLKQFSMMNRFKRKALRVIADFLSTEEVEDIKDMFKKMDSDNDGIVSIEELKAGFQNFESQLTESDVKMLLEAIDGNGRGTLEYGEFVAVFLHVKRMANDEHLRKAFSYFDKDANGYIEPDELRNALMEDGAEDCTDVANDIFQEVDTDKDGRISYEEFVAMMKTGTDWRKASRHYSRGRFNSLSLKLMKDGSLNLGAE 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1661 560 ProSitePatterns EF-hand calcium-binding domain. 472 484 IPR018247 -
Lal9g1661 560 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 13 240 541 - -
Lal9g1661 560 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 13 11 215 - -
Lal9g1661 560 MobiDBLite consensus disorder prediction 13 27 - -
Lal9g1661 560 SUPERFAMILY EF-hand 373 551 IPR011992 -
Lal9g1661 560 ProSiteProfiles EF-hand calcium-binding domain profile. 423 458 IPR002048 GO:0005509
Lal9g1661 560 ProSiteProfiles EF-hand calcium-binding domain profile. 387 422 IPR002048 GO:0005509
Lal9g1661 560 MobiDBLite consensus disorder prediction 1 32 - -
Lal9g1661 560 CDD EFh 463 525 IPR002048 GO:0005509
Lal9g1661 560 ProSitePatterns Serine/Threonine protein kinases active-site signature. 172 184 IPR008271 GO:0004672|GO:0006468
Lal9g1661 560 PANTHER SERINE/THREONINE-PROTEIN KINASE 11 215 - -
Lal9g1661 560 PANTHER SERINE/THREONINE-PROTEIN KINASE 240 541 - -
Lal9g1661 560 ProSitePatterns Protein kinases ATP-binding region signature. 58 81 IPR017441 GO:0005524
Lal9g1661 560 Gene3D Phosphorylase Kinase; domain 1 53 137 - -
Lal9g1661 560 ProSiteProfiles EF-hand calcium-binding domain profile. 495 530 IPR002048 GO:0005509
Lal9g1661 560 SUPERFAMILY Protein kinase-like (PK-like) 49 352 IPR011009 -
Lal9g1661 560 Pfam EF-hand domain pair 462 525 IPR002048 GO:0005509
Lal9g1661 560 Pfam EF-hand domain pair 390 452 IPR002048 GO:0005509
Lal9g1661 560 ProSiteProfiles EF-hand calcium-binding domain profile. 459 494 IPR002048 GO:0005509
Lal9g1661 560 Gene3D Transferase(Phosphotransferase) domain 1 138 352 - -
Lal9g1661 560 Gene3D - 353 528 - -
Lal9g1661 560 Pfam Protein kinase domain 54 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g1661 560 ProSitePatterns EF-hand calcium-binding domain. 400 412 IPR018247 -
Lal9g1661 560 ProSitePatterns EF-hand calcium-binding domain. 508 520 IPR018247 -
Lal9g1661 560 SMART efh_1 499 527 IPR002048 GO:0005509
Lal9g1661 560 SMART efh_1 391 419 IPR002048 GO:0005509
Lal9g1661 560 SMART efh_1 463 491 IPR002048 GO:0005509
Lal9g1661 560 SMART efh_1 427 455 IPR002048 GO:0005509
Lal9g1661 560 SMART serkin_6 52 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g1661 560 CDD STKc_CAMK 51 343 - -
Lal9g1661 560 ProSiteProfiles Protein kinase domain profile. 52 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1661 Lal-Chr9 18942513 18950792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1661 1 557 EF-hand Containing Proteins AT1G74740 63.540 0.0 729
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lal9g1661 Pkinase 1.1e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1661 K13412 - gmx:100793170 938.332