Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1659 ATGAGTGATTCAAATGTTGCATCAACATTTGAGGCATTTTTGCAAGGTTGGTTGATGAGGCAAAGATGCCATCTTGATGAGCTTATCTCAGCTCAACAAGACATGACAGATTTTGATAGCATAAGAGGATTGATAAACAGAGTAATTTGCCACTATGGACAATACTATGAAGAGAAATCAAAGGTTGCTCAAAACAACATCCTCCTTGTTTTCTCTCCACCATGGTTCACTTCATTGGAAAGAATGTTTCTTTGGATGGCAGGTTTCAAACCTGGGATGACATTTGAGGTTGTTACCACTGCTTTGGAGGATGAGTTATCTGAAGAACAAAAGCATAGGTTGATTCAAATCCAACAAGAGACCAAGTTGAAGGAGAGGGAACTCAATGATGACTTGGCCAAGGTTCAAGAAACCATGGCGGCACCGCCACTTTTGGAGATGGCAAGAAGCCATGGAAGGCTGTGCTTGGAAGGGCCAAGCGTGGAAGCTGAATCCAATATATCTGATCATGCAGTTCCAAACACTTTGAAGGTGGCATTGGAGAATCTGGTGATAAGGGCTGATACTTTGAGGAGAAACACAACTTTGAAAGTTGTGCAGGTACTTAGACCTACTCAGGTTGTTACCTTCTTTGTTGCTGTGGCTGAGCTTCAGCTCAAGGTGAGGGCTTGGGGTTTGGAGAAGGATGCTCAAGGTGGAGGCTAA 705 0.434 MSDSNVASTFEAFLQGWLMRQRCHLDELISAQQDMTDFDSIRGLINRVICHYGQYYEEKSKVAQNNILLVFSPPWFTSLERMFLWMAGFKPGMTFEVVTTALEDELSEEQKHRLIQIQQETKLKERELNDDLAKVQETMAAPPLLEMARSHGRLCLEGPSVEAESNISDHAVPNTLKVALENLVIRADTLRRNTTLKVVQVLRPTQVVTFFVAVAELQLKVRAWGLEKDAQGGG 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1659 234 Pfam Seed dormancy control 24 99 IPR025422 GO:0006351|GO:0043565
Lal9g1659 234 PANTHER - 5 231 - -
Lal9g1659 234 ProSiteProfiles DOG1 domain profile. 7 231 IPR025422 GO:0006351|GO:0043565
Lal9g1659 234 PANTHER TRANSCRIPTION FACTOR HBP-1B(C38)-LIKE ISOFORM X1 5 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1659 Lal-Chr9 18929416 18931358 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1659 4 223 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 28.507 2.04e-17 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1659 - - gmx:100780874 305.064