Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1657 ATGGGAACAAGAAACTTCCTCTGGAATTTTACAAAAAAGTTTGTCACATTTGGGCTCATTACTGTGACTGTATCTGACCGTTATGTGACTGTTGTACCGGTTCGAGGTGGCTCTATGTCTCCCACCTTTAATCCTAAAACCAGTCCCTCTACGGGAAATATTTCTGATGACTATGTCTTGGTCGAGAAATTTTGCCTTAACAAGTACAAGTTTTCGCATGGTGATGTGGTGGTCTTCCGCTCCCCACTGAATCACAAGGAGACACACATAAAAAGAATAGTTGCATTACCTGGTGAATGGTTTGGTAATCGTCAAAACTATGACGTGCTGAAGATTCCAGAAGGTCATTGTTGGGTTGAGGGAGACAACGCAGCTTCTAGCATGGACTCAAAGTCATTTGGACCCGTTGTTTTGGGTCTGATTAGAGGAAGAGTGACCCATGTTGTGTGGCCACCTCATAGAATAGGTGCTGTGAAAAGTACCCCACCAGAAGGACTAACCTCATTATAG 510 0.4373 MGTRNFLWNFTKKFVTFGLITVTVSDRYVTVVPVRGGSMSPTFNPKTSPSTGNISDDYVLVEKFCLNKYKFSHGDVVVFRSPLNHKETHIKRIVALPGEWFGNRQNYDVLKIPEGHCWVEGDNAASSMDSKSFGPVVLGLIRGRVTHVVWPPHRIGAVKSTPPEGLTSL 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1657 169 SUPERFAMILY LexA/Signal peptidase 29 158 IPR036286 -
Lal9g1657 169 CDD S26_SPase_I 31 145 IPR019533 GO:0004252|GO:0006465
Lal9g1657 169 Gene3D Umud Fragment, subunit A 26 160 - -
Lal9g1657 169 PRINTS Bacterial leader peptidase 1 (S26A) family signature 27 43 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lal9g1657 169 PRINTS Bacterial leader peptidase 1 (S26A) family signature 89 101 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lal9g1657 169 PRINTS Bacterial leader peptidase 1 (S26A) family signature 112 131 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lal9g1657 169 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2 1 164 IPR037730 GO:0006465|GO:0006627|GO:0008236|GO:0042720
Lal9g1657 169 Pfam Signal peptidase, peptidase S26 106 150 IPR019533 GO:0004252|GO:0006465
Lal9g1657 169 Pfam Signal peptidase, peptidase S26 8 99 IPR019533 GO:0004252|GO:0006465
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1657 39 162 MADS-box Gene Family AT1G29960 36.154 1.67e-19 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1657 K09648 - gmx:100527429 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g1657 9 18912020 18915883 Lal9g1657 9 18912020 18915883 ECH