Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1648 ATGAAGCTTGTACCTATTTGGTTGCTTCTCTTAATGTTCTTATTTTGCTTCTTAGTACCTTCTTCATCTGCAATATTGAAAGGTGGAAGTGATGAAGCAAATGCTCTATTGAAATGGAAAGCTAGCTTTGACAATACAAGCCAAACTTTGTTATCTTCATGGACTAACAATGGCAATGGTCCTTGCAGCAATAATTGGATTGGTATTGAATGTGATGAATCCAAATCAGTTTCATACATAACTCTTCTAAATATGGGATTAAAAGGTACCCTTCAAAGTCTTAACTTCTCATCATTTTCCAATATCCTTTGTATAGATATAAGCAACAACTCATTTTATGGAACTATTCCTACACAAATTGGGTTGCTTTCAAATTTAGACACTCTTTCTTTATCCAATAATAACCTATCTGGTAGCATTCCGAAAAGCATTGGTAATCTATCAAAACTCTCGTATCTTGATCTTAGTGTTAATAGTTTTGTCGGTACTATTCCACATGAAATAACACAAGTAGTTGGTCTTAAAGAAGTTGATATTAGTAACAACACTCTCATAGGATCTATCCCTATATCAATAGGAGCATTGGCCAATTTATCATTTCTATGGTTAGGTAACAACAAATTGTCTGGTCATATACCTAGTGAAATTGGAAAGCTTGTTAACCTTAGGAATCTATGGCTTGAAGGTAATAATCTTTCAGGTATCATTCCTAATGAATTGGGTATGATGAGAAGTGTCAATGATATTGATTTGTCTGGAAATTTTCTCTTTGGTAGAATACCATATTCAATAGGAAATTTGAGCAATTTGCAACATCTTTCACTTCACAACAACACTCTTACAGGTTTTATTCCTGAAGAAGTGGGAAAACTCAATTCTCTTATCACAATCCAATTGCAATCTAATAATCTTTCTGGGTCAATCCCACAATCCGTAGGTAACTTGGTCAATTTGGAGACCATGATACTTTGGAGAAATAATCTTTCTGGGTCAATCCCTTCCGCTATTGGAAATTTGACAAAACTCAAAAAAATATCATTTTGTTCAAATGAATTATCCGGGCCATTCCCACCCTCAATAGGAAACTTGACCAATCTCAAAGATTTGCATTTAGCATATAATCATTTCATAGGACACTTGCCTCCAAACATTTGCCATAATGGAATATTGGAAAAGTTAAGTGCTAATGGTAACCATTTTAGAGGTCAAATCCCAAAGAACATAAGAAATTGTTCTAGTCTTATAAGGGTTAGACTTGAACAAAACCACTTGACTGGAAATATCACAGAAGATTTTGGTGAATATCCAAATTTGAATTACATGGATTTAAGTGATAACAATTTTTATGGACACCTTTCACCAAAGTGGGGGAAATGCTATAGCCTTCAAAGCCTTAAGATCTCCAACAACAATTTATCTGGTTACATACCACCAGAATTAACCGAGGCCACGAACTTACGCGTACTTCACCTATCTTCAAACCACCTAACGGGAAAAATCCCATCGGAGCTAGGTAATTTGACCATGTTGAATCAACTATCAATGAGCAACAATCATCTTTCAGGAAATGTTCCAATTCAAATAGCATCATTGAATGAACTTCAAACCTTGGAGCTTGCTGCCAATGATTTCAGTGGAGCCATCATAAAAGAACTTGGAAATTTGCCCAAGTTATTGCATTTGAATCTGAGCCAAAATAGATTTGTAGAACATATTCCTTTTGAGTTTGGTAGATTCCAATCTCTTCAAAGTCTTGATCTTAGCAACAATTTGTGGAGTGGAAAAATACCTACCACACTTGGAAACCTGAAATACCTAGAAACATTGAATCTCTCACACAATAATCTTTCTGGTGCAATTCCCTCTAGTTTTGATGATATGTTAAGCTTAACATTTGTTGATATATCATACAACCAATTAGATGGTCCACTTCCAAGAATACCAGCTTTTCAAAACCTTTCCATTGAAGCATTGAGAAACAACAAAGGTTTGTGTGGTAATATCTCAGGCCTTAACCCTTGTTCATCATCACACAACAAGCCTCAACATCACAAGAACAACAAAGTCTTGCAACTTGTTTTATCCATTACTTTGGGCATTCTAATGCTTCTTCTATTGGTGTTCATAGTTTCATATTGTTTTTGCCTAAGTGTAAGTTCAAAAGAAAACCAGGTTGTGGAATCACAAACTCAAAATCTCTTTTCAATATGGAGTTATGATGGGAGAATGGTGTATGAGAATATTATTGAAGCTACAGAAGAATTTGACAACAAATATCTCATTGGAGTTGGAGGTTGTGGTTATGTTTATAGAGCTGAGTTACCAACTGGTCAAGTTGTTGCTGTGAAGAAACTTCATTCAATACAAAGTGAGGAAACATATAATCATAAAGCTTTCCAAAGAGAGATAGAAGCTTTGACAAAAATTCGGCATCGAAATATTGTGAAGCTATATGGGTTTTGTTCACATTCTCATCACTCATTTTTAGTATATGAGTTGATGGAAAAGGGTAGCATTGATATGATTCTTCGGAATGATGCAGAAGCTATTGAATTTGATTGGAATAGAAGGGTGAATGTTGTTAAAGGAGTAGCCAATGCATTGAGTTATATGCACCATTATTGTTCACCTCCTATTGTTCATAGAGATATATCATCAAAGAATGTTCTTTTAGATGTGAACTATGAGGCTCATGTTTCTGACTTTGGAACTGCTACACTTCTTAATCCTCATTCTTCAAATTGGACCTCATTTGCAGGCACCTTTGGATATGCTGCTCCAGAACTTGCTTATACTATGGAAGTGAGTGAGAAATGTGATGTGTATAGCTTTGGGGTATTTGCATTGGAAATAATGTTTGGAAAGCATCCAGCACAAGTTATATTATCTACAATGTTAGTATCTTCTATGGCTTCAACAATTGAGAGTTTGTTATTGAATGAGAAATTGGATAAACGAATTCCTTATCCTACAAATCAATATGAGAAGGAAGTAACATCAATTCTAAGAATAGGAATTGCATGTTTGAGTGAAACTCCACGTTCTCGCCCTACAATGGAACAAGTAGTGAAGAAAATAATGATCACAACTTCATGA 3096 0.3495 MKLVPIWLLLLMFLFCFLVPSSSAILKGGSDEANALLKWKASFDNTSQTLLSSWTNNGNGPCSNNWIGIECDESKSVSYITLLNMGLKGTLQSLNFSSFSNILCIDISNNSFYGTIPTQIGLLSNLDTLSLSNNNLSGSIPKSIGNLSKLSYLDLSVNSFVGTIPHEITQVVGLKEVDISNNTLIGSIPISIGALANLSFLWLGNNKLSGHIPSEIGKLVNLRNLWLEGNNLSGIIPNELGMMRSVNDIDLSGNFLFGRIPYSIGNLSNLQHLSLHNNTLTGFIPEEVGKLNSLITIQLQSNNLSGSIPQSVGNLVNLETMILWRNNLSGSIPSAIGNLTKLKKISFCSNELSGPFPPSIGNLTNLKDLHLAYNHFIGHLPPNICHNGILEKLSANGNHFRGQIPKNIRNCSSLIRVRLEQNHLTGNITEDFGEYPNLNYMDLSDNNFYGHLSPKWGKCYSLQSLKISNNNLSGYIPPELTEATNLRVLHLSSNHLTGKIPSELGNLTMLNQLSMSNNHLSGNVPIQIASLNELQTLELAANDFSGAIIKELGNLPKLLHLNLSQNRFVEHIPFEFGRFQSLQSLDLSNNLWSGKIPTTLGNLKYLETLNLSHNNLSGAIPSSFDDMLSLTFVDISYNQLDGPLPRIPAFQNLSIEALRNNKGLCGNISGLNPCSSSHNKPQHHKNNKVLQLVLSITLGILMLLLLVFIVSYCFCLSVSSKENQVVESQTQNLFSIWSYDGRMVYENIIEATEEFDNKYLIGVGGCGYVYRAELPTGQVVAVKKLHSIQSEETYNHKAFQREIEALTKIRHRNIVKLYGFCSHSHHSFLVYELMEKGSIDMILRNDAEAIEFDWNRRVNVVKGVANALSYMHHYCSPPIVHRDISSKNVLLDVNYEAHVSDFGTATLLNPHSSNWTSFAGTFGYAAPELAYTMEVSEKCDVYSFGVFALEIMFGKHPAQVILSTMLVSSMASTIESLLLNEKLDKRIPYPTNQYEKEVTSILRIGIACLSETPRSRPTMEQVVKKIMITTS 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1648 1031 Gene3D Ribonuclease Inhibitor 25 102 IPR032675 -
Lal9g1648 1031 Gene3D Ribonuclease Inhibitor 358 683 IPR032675 -
Lal9g1648 1031 Pfam Protein kinase domain 757 1025 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g1648 1031 SUPERFAMILY Protein kinase-like (PK-like) 735 1026 IPR011009 -
Lal9g1648 1031 Pfam Leucine rich repeat 436 496 IPR001611 GO:0005515
Lal9g1648 1031 Pfam Leucine rich repeat 317 376 IPR001611 GO:0005515
Lal9g1648 1031 Pfam Leucine rich repeat 581 640 IPR001611 GO:0005515
Lal9g1648 1031 ProSitePatterns Tyrosine protein kinases specific active-site signature. 879 891 IPR008266 GO:0004672|GO:0006468
Lal9g1648 1031 SMART LRR_sd22_2 219 240 - -
Lal9g1648 1031 SMART LRR_sd22_2 123 149 - -
Lal9g1648 1031 SMART LRR_sd22_2 267 288 - -
Lal9g1648 1031 SMART LRR_sd22_2 195 218 - -
Lal9g1648 1031 SMART LRR_sd22_2 339 365 - -
Lal9g1648 1031 SMART LRR_typ_2 315 339 IPR003591 -
Lal9g1648 1031 SMART LRR_typ_2 363 387 IPR003591 -
Lal9g1648 1031 SMART LRR_typ_2 219 242 IPR003591 -
Lal9g1648 1031 SMART LRR_typ_2 195 218 IPR003591 -
Lal9g1648 1031 SMART LRR_typ_2 555 579 IPR003591 -
Lal9g1648 1031 SMART LRR_typ_2 484 507 IPR003591 -
Lal9g1648 1031 SMART LRR_typ_2 123 147 IPR003591 -
Lal9g1648 1031 SMART LRR_typ_2 603 626 IPR003591 -
Lal9g1648 1031 SMART LRR_typ_2 267 291 IPR003591 -
Lal9g1648 1031 ProSiteProfiles Leucine-rich repeat profile. 485 508 IPR001611 GO:0005515
Lal9g1648 1031 Gene3D Transferase(Phosphotransferase) domain 1 834 1030 - -
Lal9g1648 1031 ProSiteProfiles Protein kinase domain profile. 755 1028 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g1648 1031 SUPERFAMILY L domain-like 409 666 - -
Lal9g1648 1031 Gene3D Phosphorylase Kinase; domain 1 716 833 - -
Lal9g1648 1031 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 4 174 - -
Lal9g1648 1031 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 153 283 - -
Lal9g1648 1031 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 254 1028 - -
Lal9g1648 1031 SUPERFAMILY L domain-like 66 400 - -
Lal9g1648 1031 ProSiteProfiles Leucine-rich repeat profile. 125 147 IPR001611 GO:0005515
Lal9g1648 1031 Gene3D Ribonuclease Inhibitor 103 172 IPR032675 -
Lal9g1648 1031 Gene3D Ribonuclease Inhibitor 173 245 IPR032675 -
Lal9g1648 1031 Pfam Leucine rich repeat N-terminal domain 31 72 IPR013210 -
Lal9g1648 1031 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 254 1028 - -
Lal9g1648 1031 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 4 174 - -
Lal9g1648 1031 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 153 283 - -
Lal9g1648 1031 Gene3D Ribonuclease Inhibitor 246 357 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1648 Lal-Chr9 18845428 18848899 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1648 10 927 Receptor kinase-like Gene Family AT4G08850 45.622 0.0 775
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal9g1648 Pkinase 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1648 - - lang:109325562 1202.19