Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1630 ATGGGTGGTGTTGCATGGACAGAAGAAGAAGATCACATGCTTAAGAAATGCATAGAGCAATATGGAGAAGGAAAGTGGCATCGAGTTCCTTTATTGGCTGGTCTAAACCGGTGCCGGAAGAGTTGCAGGCTAAGATGGTTGAACTATCTCCGGCCGAACATCAAACGAGGAAGTTTTGGAGAGGAAGAAGTGGAAATGATTATCGAACTCCACAAATTATTAGGCAACAGGTGGTCACTAATTGCAGGACGGTTACCAGGAAGAACAGCCAATGATGTGAAGAACTATTGGAACTGTCATCTACGTAAGAAATTGAATGCTATAGAAGCTGAGAACACACAAATGAACAGAAACGTTGAAGCCATTAGGCCTAATCAACCTAGAAACATTGGTCCAATTGACCAAGAATCTCAACAACAAGAGAGTGTCATTTCATCTTTGACATTTGATGCTGAAGGAGAGAGCCATATTCTTGAACCACAGCAAGAAATTATATATTCATGTTTGGACCAACAAGGCATTATTAATGACTTGCCAATGGAATTTCAATATGAATGTGTTGAAGGAATGATAAGTGGAGTGGGTAGTAGTAGTAATCAATGTGATTGGGATGATTTACTGTTAAACATGGATATGTATGATGAATTTTCTTCTTAG 657 0.3942 MGGVAWTEEEDHMLKKCIEQYGEGKWHRVPLLAGLNRCRKSCRLRWLNYLRPNIKRGSFGEEEVEMIIELHKLLGNRWSLIAGRLPGRTANDVKNYWNCHLRKKLNAIEAENTQMNRNVEAIRPNQPRNIGPIDQESQQQESVISSLTFDAEGESHILEPQQEIIYSCLDQQGIINDLPMEFQYECVEGMISGVGSSSNQCDWDDLLLNMDMYDEFSS 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1630 218 Gene3D - 57 127 - -
Lal9g1630 218 ProSiteProfiles Myb-like domain profile. 6 50 IPR001005 -
Lal9g1630 218 ProSiteProfiles Myb-like domain profile. 51 101 IPR001005 -
Lal9g1630 218 Pfam Myb-like DNA-binding domain 56 98 IPR001005 -
Lal9g1630 218 Pfam Myb-like DNA-binding domain 5 50 IPR001005 -
Lal9g1630 218 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 5 215 - -
Lal9g1630 218 SMART sant 55 103 IPR001005 -
Lal9g1630 218 SMART sant 2 52 IPR001005 -
Lal9g1630 218 Gene3D - 4 55 - -
Lal9g1630 218 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 50 IPR017930 -
Lal9g1630 218 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 51 105 IPR017930 -
Lal9g1630 218 CDD SANT 58 101 IPR001005 -
Lal9g1630 218 PANTHER MYB TRANSCRIPTION FACTOR 5 215 - -
Lal9g1630 218 SUPERFAMILY Homeodomain-like 5 97 IPR009057 -
Lal9g1630 218 CDD SANT 5 50 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1630 Lal-Chr9 18740929 18742033 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1630 5 121 MYB Transcription Factor Family AT1G66370 66.667 6.87e-56 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lal9g1630 Myb_DNA-binding 3.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1630 K09422 - gmx:100809746 319.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g1630 9 18740929 18742033 Lal1g2211 1 24059765 24061313 LSH