Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1627 ATGGCTGGAAAACAAGAAGAGGTGAAGCTTTTGGGAACTACGGGAAGTCCATTTGTTTTTAGGGCTATCCTTGCTCTTAAGCTGAAGGGTATTGAATACGAATTTGTAGAAGAAAATTTGGGCAATAAGAGTGATTTGCTCATTAAATATAACCCTATTTACAAGAAGGTTCCTGTTCTTGTTCATAATGAGAAGGCAATATCAGAGTCACTTCTGATTGTTGAGTATATTGATGAGGCTTGGAAAGGAAACCCTCTCTTACCTACAGAACCTTACCATAAAGCCTTGGCACGTTTCTGGGCCAAGTTCATAGATGACAAGGTCATTGCTGTTATAAGAAAAGCTCTTTTCACCAAAGATGAAAAGGCACGTGAGGAAGGTGTTGAAGAATCATTTGAAGCTCTACAATTTCTTGAGAATGAACTCAAAGACAAGTTCTTTGGTGGAGAGGAGATTAATTTTGTGGACATAGCTGCTGCAATTATAGCATTTTGGGTCCCTATATTTGAAGAAGTTAGTGGAGTTGAATTGATCACAAGTGTGAAATTTCCTAAGCTCTATAATTGGAGTCAAGAACTTATCAACCATCCAATTGTCAAAGAAAACCTACCTCCTAGAGACCCACTTTTGGCCTTCTTCAAAGGTCTCTTTGCAAACATTCCTGCTTCAAAATAG 675 0.3837 MAGKQEEVKLLGTTGSPFVFRAILALKLKGIEYEFVEENLGNKSDLLIKYNPIYKKVPVLVHNEKAISESLLIVEYIDEAWKGNPLLPTEPYHKALARFWAKFIDDKVIAVIRKALFTKDEKAREEGVEESFEALQFLENELKDKFFGGEEINFVDIAAAIIAFWVPIFEEVSGVELITSVKFPKLYNWSQELINHPIVKENLPPRDPLLAFFKGLFANIPASK 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1627 224 CDD GST_N_Tau 8 81 - -
Lal9g1627 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 212 IPR010987 -
Lal9g1627 224 Pfam Glutathione S-transferase, C-terminal domain 101 197 IPR004046 -
Lal9g1627 224 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Lal9g1627 224 SFLD Main (cytGST) 4 222 - -
Lal9g1627 224 Gene3D Glutaredoxin 1 89 - -
Lal9g1627 224 SFLD Main.3: Omega- and Tau-like 4 222 IPR045073 -
Lal9g1627 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Lal9g1627 224 CDD GST_C_Tau 91 216 IPR045074 GO:0004364|GO:0006749
Lal9g1627 224 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 1 219 - -
Lal9g1627 224 SUPERFAMILY GST C-terminal domain-like 79 218 IPR036282 -
Lal9g1627 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 219 IPR045073 -
Lal9g1627 224 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Lal9g1627 224 Gene3D - 90 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1627 Lal-Chr9 18646539 18648427 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1627 4 223 Glutathione S-transferase Gene Family AT3G09270 51.121 1.18e-78 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1627 K00799 - gmx:100500680 330.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g1627 9 18646539 18648427 Lal9g1627 9 18646539 18648427 ECH
Lal2g1878 2 21060421 21061883 Lal9g1627 9 18646539 18648427 LSH