Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1607 ATGCCTAACATTTTTCAACTCTTGTCTATGATACTATTCCTTTTGATCCAAGTTTCATCTCATCTTGACCAAGTTTTATATGCTGGATTCAAAGATGCTATAGGTGACAACAATCTTACCTTAAATGGAGTAGCAGAAATTGAGAAAAATGGTATACTAAGATTAACAAATGACACAAGCAGATTAATGGGTCATGCTTTTTATCCCTCACCTTTTCAATTCAAGAACTCAACAAATGGTAAAGTTTTTTCATTTTCTACCTCATTTGCTCTTGCTATTGTTCCTGAGTATCCAAAACTAGGTGGGCATGGCCTAGCTTTTACTATAGCACCTTCTAAAGATCTTAAAGCTCTACCTAGTCAATATCTTGGTCTTCTTAATTCAAGTGATATTGGTAACTTCTCAAATCATATTTTTGCTGTTGAGTTTGATACTGTCAAAGACTTTGAGTTTGGTGATATCAATGATAACCATGTTGGTATTGACATCAATAGTTTGCAGTCAAATGCATCTGAAACTGCAGGTTATTACACTGATGACTCAACCAAACAAGATCTAACACTAGAAAGTGGGAAAACAATACTAGCTTGGGTTGATTATGATTCTGATCAAAGCCTTGTTAGTGTTACACTTTCACCTTCTTCTACCAAACCCAAAAAACCAACCTTGTCCTTTGTTATGGATCTTTCACCAATTTTTCATGATGCTATGTATGTTGGGTTTTCTGCATCAACTGGTTTGCTTGCTAGTTCTCACTACATCTTGGGTTGGAGCTTTAAAATCAATGGAATAGCACCAACCCTTGATTTATCTTCTCTTCCACAACTTCCAAGACCAAAGAAGAATCAAAGTCCTATGATAATAGGTGTTTCAGTCTCAGTTTCTGTATTTGCATTATGTGTTATCTTCATTGGGATTTATCTATTTTGGAAAGTAAAGAATGCTGATGTTATAGAAGCATGGGAGCTTGTGATTGGGCCACATAGGTACTCCTACAAAGAGCTCAAGAAAGCTACAAAGGGTTTCAAGGAGAAAGAGTTACTTGGGCAAGGTGGATTTGGCAAAGTTTTCAAAGGGACATTGCCTAATTCAAAGACAGAAGTAGCTGTTAAGAGAGTTTCACATGAATCAAAACAAGGCCTTAGAGAATTCGTGTCCGAAATCGCAAGCATAGGCAGGCTTCGCCACCGGAATCTTGTTCAGTTATTAGGTTGGTGTCGACGCTGCGGCGACCTCTTACTCGTGTACGATTTCATGGCTAATGGTAGCTTGGACAAGTACCTATTTGATGAGCCTAAGATTGTGCTAAGTTGGGAGCAAAGGTTCAAGATAATTAAGGATGTTGCATCAGGTATTCTTTATCTCCATGAAGGGTATGAGCAAGTGGTTATACATAGAGATGTTAAAGCTAGCAATGTGTTACTAGATTTTGAACTAAATGGAAGACTAGGTGATTTTGGATTAGCAAGGTTATATGAACATGGGTCTAACCCAAGCACCACAAGGGTGGTTGGTACATTAGGCTATTTGGCACCAGAATTGCCTAGAACAGGAATAGCAACAACTAGCACTGATGTTTATGCATTTGGTGCACTTTTGCTTGAGGTAGCATGTGGAAGAAGACCTATTGAACAAAAGGCATTACCAGAAGAGATGATTTTGGTGGATTGGATATGGGAAAAGTACAAAGAAGGGAGAATATTTGATGTGATGGACCTAAAACTAAATGGTATATTTGATGAGAATGAGGCTTTGTTAGTGTTGAAATTGGGTATGATATGTTCAAATAATGATCCTAATGTTAGGCCTAGCATGAGACAAATTGTGAGGTATTTGGATGGAGAAGTTGAGTTACCACATGACTTTAGAAAGCCACAAGATTTAAGCCACAATGAAGGGTTTGATGAATTTTTGCACTCACTTGCACTTTCTTCCTTTGATAAGATGAGTTGTAATTCATATCCTTCTTTTGGTTATTCACCCCAATCACTTCTTCATGCTAGAGGAGAAACTAGGTGA 2019 0.3764 MPNIFQLLSMILFLLIQVSSHLDQVLYAGFKDAIGDNNLTLNGVAEIEKNGILRLTNDTSRLMGHAFYPSPFQFKNSTNGKVFSFSTSFALAIVPEYPKLGGHGLAFTIAPSKDLKALPSQYLGLLNSSDIGNFSNHIFAVEFDTVKDFEFGDINDNHVGIDINSLQSNASETAGYYTDDSTKQDLTLESGKTILAWVDYDSDQSLVSVTLSPSSTKPKKPTLSFVMDLSPIFHDAMYVGFSASTGLLASSHYILGWSFKINGIAPTLDLSSLPQLPRPKKNQSPMIIGVSVSVSVFALCVIFIGIYLFWKVKNADVIEAWELVIGPHRYSYKELKKATKGFKEKELLGQGGFGKVFKGTLPNSKTEVAVKRVSHESKQGLREFVSEIASIGRLRHRNLVQLLGWCRRCGDLLLVYDFMANGSLDKYLFDEPKIVLSWEQRFKIIKDVASGILYLHEGYEQVVIHRDVKASNVLLDFELNGRLGDFGLARLYEHGSNPSTTRVVGTLGYLAPELPRTGIATTSTDVYAFGALLLEVACGRRPIEQKALPEEMILVDWIWEKYKEGRIFDVMDLKLNGIFDENEALLVLKLGMICSNNDPNVRPSMRQIVRYLDGEVELPHDFRKPQDLSHNEGFDEFLHSLALSSFDKMSCNSYPSFGYSPQSLLHARGETR 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1607 672 Pfam Legume lectin domain 26 273 IPR001220 GO:0030246
Lal9g1607 672 PANTHER - 6 649 - -
Lal9g1607 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Lal9g1607 672 CDD lectin_legume_LecRK_Arcelin_ConA 27 263 IPR001220 GO:0030246
Lal9g1607 672 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 6 649 - -
Lal9g1607 672 SMART serkin_6 342 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g1607 672 ProSitePatterns Protein kinases ATP-binding region signature. 348 371 IPR017441 GO:0005524
Lal9g1607 672 SUPERFAMILY Protein kinase-like (PK-like) 323 631 IPR011009 -
Lal9g1607 672 ProSiteProfiles Protein kinase domain profile. 342 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g1607 672 Gene3D Transferase(Phosphotransferase) domain 1 419 628 - -
Lal9g1607 672 Gene3D - 25 263 - -
Lal9g1607 672 Gene3D Phosphorylase Kinase; domain 1 327 418 - -
Lal9g1607 672 CDD STKc_IRAK 348 614 - -
Lal9g1607 672 Pfam Protein kinase domain 342 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g1607 672 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 280 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1607 Lal-Chr9 18379329 18381347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1607 18 632 Receptor kinase-like Gene Family AT3G55550 62.058 0.0 778
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lal9g1607 Pkinase 4.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1607 - - gmx:100784346 1050.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g1607 9 18379329 18381347 Lal5g1170 5 14421353 14424637 ECH
Lal9g1607 9 18379329 18381347 Lal9g1607 9 18379329 18381347 ECH
Lal9g1607 9 18379329 18381347 Lal1g2198 1 23960285 23962342 LSH