Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1599 ATGGGTCATGCTTTTTATCCCTCACCTTTTCAATTCAAGAACTCAACAAATGGTAAAGTTTTTTCATTTTCTACCTCATTTGCTCTTGCTATTGTTCCTGAGTATCCAAAACTAGGTGGGCATGGCCTAGCTTTTACTATAGCACCTTCTAAAGATCTTAAAGCTCTACCTAGTCAATATCTTGGTCTTCTTAATTCAAGTGATATTGGTAACTTCTCAAATCATATTTTTGCTGTTGAGTTTGATACTGTCAAAGACTTTGAGTTTGGTGATATCAATGATAACCATGTTGTCAATGCATCTGAAACTGCAGGTTATTACACTGATGACTCAACCAAACAAGATCTAACACTAGAAAGTGGGAAAACAATACTAGCTTGGGTTGATTATGATTCTGATCAAAGCCTTGTTAGTGTTACACTTTCACCTTCTTCTAACCAAACCCAAAAAACAACCTTGTCCTTTGTTATGGATCTTTCACCAATTTTTCATGATGCTATGTATGTTGGGTTTTCTGCATCAACTGGTTTGCTTGCTAGTTCTCACTACATCTTGGGTTGGAGCTTTAAAATCAATGGAATAGCACCAACCCTTGATTTATCTTCTCTTCCACAACTTCCAGACCAAAGAAGAATCAAAAATGCTGATGTTATAGAAGCATGGGAGCTTGTGATTGGGCCACATAGGTACTCCTACAAAGAGCTCAAGAAAGCTACAAAGGGTTTCAAGGAGAAAGAGTTACTTGGGCAAGGTGGATTTGGCAAAGTTTTCAAAGGGACATTGCCTAATTCAAAGACAGAAGTAGCTGTTAAGAGAGTTTCACATGAATCAAAACAAGGCCTTAGAGAATTCGTGTCCGAAATCGCAAGCATAGGCAGGCTTCGCCACCGGAATCTTGTTCAGTTATTAGGTTGGTGTCGACGCTGCGGCGACCTCTTACTCGTGTACGATTTCATGGCTAATGGTAGCTTGGACAAGTACCTATTTGATGAGCCTAAGATTGTGCTAAGTTGGGAGCAAAGGTTCAAGATAATTAAGGATGTTGCATCAGGTATTCTTTATCTCCATGAAGGGTTATATGAACATGGGTCTAACCCAAGCACCACAAGGGTGGTTGGTACATTAGGCTATTTGGCACCAGAATTGCCTAGAACAGGAATAGCAACAACTAGCACTGATGTTTATGCATTTGGTGCACTTTTGCTTGAGGTAGCATGTGGAAGAAGACCTATTGAACAAAGGCATTACCAGAAGAGATGA 1260 0.3968 MGHAFYPSPFQFKNSTNGKVFSFSTSFALAIVPEYPKLGGHGLAFTIAPSKDLKALPSQYLGLLNSSDIGNFSNHIFAVEFDTVKDFEFGDINDNHVVNASETAGYYTDDSTKQDLTLESGKTILAWVDYDSDQSLVSVTLSPSSNQTQKTTLSFVMDLSPIFHDAMYVGFSASTGLLASSHYILGWSFKINGIAPTLDLSSLPQLPDQRRIKNADVIEAWELVIGPHRYSYKELKKATKGFKEKELLGQGGFGKVFKGTLPNSKTEVAVKRVSHESKQGLREFVSEIASIGRLRHRNLVQLLGWCRRCGDLLLVYDFMANGSLDKYLFDEPKIVLSWEQRFKIIKDVASGILYLHEGLYEHGSNPSTTRVVGTLGYLAPELPRTGIATTSTDVYAFGALLLEVACGRRPIEQRHYQKR 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1599 419 CDD lectin_legume_LecRK_Arcelin_ConA 1 193 IPR001220 GO:0030246
Lal9g1599 419 Gene3D Transferase(Phosphotransferase) domain 1 361 419 - -
Lal9g1599 419 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 1 210 - -
Lal9g1599 419 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 359 415 - -
Lal9g1599 419 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 211 358 - -
Lal9g1599 419 SUPERFAMILY Protein kinase-like (PK-like) 218 415 IPR011009 -
Lal9g1599 419 ProSiteProfiles Protein kinase domain profile. 242 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g1599 419 Pfam Legume lectin domain 1 203 IPR001220 GO:0030246
Lal9g1599 419 Gene3D Phosphorylase Kinase; domain 1 227 318 - -
Lal9g1599 419 PANTHER - 211 358 - -
Lal9g1599 419 PANTHER - 359 415 - -
Lal9g1599 419 PANTHER - 1 210 - -
Lal9g1599 419 ProSitePatterns Protein kinases ATP-binding region signature. 248 271 IPR017441 GO:0005524
Lal9g1599 419 Gene3D - 1 193 - -
Lal9g1599 419 Gene3D Transferase(Phosphotransferase) domain 1 319 360 - -
Lal9g1599 419 SUPERFAMILY Concanavalin A-like lectins/glucanases 1 208 IPR013320 -
Lal9g1599 419 Pfam Protein tyrosine and serine/threonine kinase 244 360 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1599 Lal-Chr9 18346379 18347845 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1599 1 412 Receptor kinase-like Gene Family AT3G55550 56.851 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lal9g1599 Lectin_legB 7.9e-58 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1599 - - gmx:100784346 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g1599 9 18346379 18347845 Lal9g1599 9 18346379 18347845 ECH
Lal9g1599 9 18346379 18347845 Lal1g2192 1 23939874 23941877 LSH