Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1592 ATGGGTGCTTGTTGGAGCAACAGGATTAAGGCTGTGAGTCCTTCAAATACAGGGTTCACATCTAGAAGTGTAAGCAGGAGTGGCTATGACACCAGCTCAAATAGCAGGAATTCATCAGCCTCCGTACCCGCAATTCCTCGAAGTGAAGATGAGATCTTACAATCTTCCAATCTGAAAAGCTTCAGCTACAGTGATGTAAGAGCTGCCACAAGAAATTTCCGCCCCGACAGTGTCTTGGGGGAGGGTGGTTTTGGTTCAGTTTTCAAGGGCTGGATCGATGAGCAATCACTTGCTGCTACCAAACCAGGAACAGGCATGGTTGTGGCTGTTAAGAGACTTAACCAAGACGGTTTGCAGGGTCATAAGGAATGGTTGGTTGAAATCAACTATCTTGGGCAACTGCAGCATCCTAATGTGGTTAAGTTAATAGGATATTGCTTTGAGGATGAGCATCGGCTTCTGGTTTATGAGTTTATGCCTAAGGGTAGTGTGGATAACCATCTATTCAGAAGAGGTTCATTTTTTCAGCCACTCTCTTGGAGTTTGCGGTTGCAAATAGCCCTAGGGGCTGCAAGGGGTCTTGCATTTCTCCATAGTACAGTACCTAAAGTCATATATCGTGACTTTAAGACTTCAAATATCCTGCTTGATACTAAATACAATGCCAAACTTTCCGATTTTGGGTTGGCTAGAGATGGGCCAACTGGTAACAAAAGCCATGTCTCTACTAGGGTCATTGGAACCCGGGGATATGCTGCACCGGAGTATCTAGCAACAGGTCATCTAACTACAAAGAGTGATGTGTATAGCTTTGGAGTAGTTCTTCTGGAAATGATAACAGGAAAACGAGTGATAGACAAGAACCAGCCACCCGGAGAACATAACTTAGTTGAATGGGCCAAACCGTACCTATCTAATAAACGTAGAGTTTTTCGTGTAATGGATCCTCGTCTTGAAGGTCAGTATTCTCATAATCGAGCACAAGCGGCAGCCACGCTTGCTTTACAATGTCTCGATAGTGAACCTAAGTGGAGGCCTAATATGGACGAGGTGGTAAAGGCATTGGAACAACTTCAGGACACCCAAAAGAAAAGTGCTGAAAAGAAAGAGCATTATCGTGTGCATGGTTCTGGCCTCGGCAATTCCAATGGCCACCACCCTGCGTCGAGCAAAGGTAGTGCCGATGCTCCCCGAAAGGCTTCTGCATATCCCAGGCCTTCCGCATCTCTTCTTGACACGTAA 1242 0.4565 MGACWSNRIKAVSPSNTGFTSRSVSRSGYDTSSNSRNSSASVPAIPRSEDEILQSSNLKSFSYSDVRAATRNFRPDSVLGEGGFGSVFKGWIDEQSLAATKPGTGMVVAVKRLNQDGLQGHKEWLVEINYLGQLQHPNVVKLIGYCFEDEHRLLVYEFMPKGSVDNHLFRRGSFFQPLSWSLRLQIALGAARGLAFLHSTVPKVIYRDFKTSNILLDTKYNAKLSDFGLARDGPTGNKSHVSTRVIGTRGYAAPEYLATGHLTTKSDVYSFGVVLLEMITGKRVIDKNQPPGEHNLVEWAKPYLSNKRRVFRVMDPRLEGQYSHNRAQAAATLALQCLDSEPKWRPNMDEVVKALEQLQDTQKKSAEKKEHYRVHGSGLGNSNGHHPASSKGSADAPRKASAYPRPSASLLDT 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1592 413 Gene3D Phosphorylase Kinase; domain 1 48 158 - -
Lal9g1592 413 ProSiteProfiles Protein kinase domain profile. 73 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g1592 413 SUPERFAMILY Protein kinase-like (PK-like) 57 358 IPR011009 -
Lal9g1592 413 ProSitePatterns Protein kinases ATP-binding region signature. 79 111 IPR017441 GO:0005524
Lal9g1592 413 Gene3D Transferase(Phosphotransferase) domain 1 159 379 - -
Lal9g1592 413 Pfam Protein kinase domain 76 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g1592 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Lal9g1592 413 MobiDBLite consensus disorder prediction 13 46 - -
Lal9g1592 413 MobiDBLite consensus disorder prediction 361 413 - -
Lal9g1592 413 PANTHER OS01G0588500 PROTEIN-RELATED 22 393 - -
Lal9g1592 413 CDD STKc_IRAK 79 358 - -
Lal9g1592 413 PANTHER KINASE 1B 22 393 - -
Lal9g1592 413 MobiDBLite consensus disorder prediction 361 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1592 Lal-Chr9 18289973 18294221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1592 22 355 Glycoside Hydrolase AT3G07070 48.225 1.02e-106 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lal9g1592 Pkinase 2.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1592 - - gmx:100819620 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g1592 9 18289973 18294221 Lal9g1592 9 18289973 18294221 ECH