Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1590 ATGAACGATAGTATTGCTGAGATGAAATCAGAGGAGTGTTGTCAGGAGAATAAGCAATCTACTGCTGCTTCGTGCTCTTCGGTATCAGAAGGCTGTGGCAGTGCAATTCACAAGTCCACAACCATACGTAGTCCGGCACCAACGTCTCCTTCACACCGGAGGACCACCGGCCCTATAAGGCGCGCAAAGGGAGGTTGGACAGCACAGGAGGATGAGACGTTAAGGAATGCTGTTGCAGCTTTTAAAGGAAAGAGTTGGAAGAAAATAGCCGAGTATTTTCCTGACAGATCAGAAGTTCAGTGTCTGCACAGATGGCAAAAAGTTCTTAATCCAGAACTTGTTAAAGGACCTTGGACACAAGAGGAGGATGATAAAATTGTTGAACTGGTGTCAGAACATGGGCCAACAAAATGGTCTTTGATAGCGAAGGCTTTACCTGGTCGGATAGGGAAACAGTGCCGAGAACGGTGGCACAATCATCTCAATCCCGACATAAAAAAAGATGCATGGACTATGGAAGAGGAATTGACCTTGATGAATGCTCATGGTACACATGGGAATAAATGGGCTGAAATAGCCAAGGTCCTTCCGGGAAGGACTGACAACGCAATAAAGAACCACTGGAATAGTTCTTTGAAGAAAAAGTTGGATTTTTATACAGCTACAGGAAGACTTCCTCCAATTTCAAAGAACAATACACAAATCACTGTCAAAGATTCAATTAGACAATCTGTTAATGAAACACTACTTGTTTGTTCAAACAAAGAATTAAATGCAGCTATTGAAACATCTTCTGAAACTACTGCCATTAGTAAGCTAGATGACAGTAGCAAGAATCAGTTAGAGTCCTCAGGAACAGCAAGAGAAGTCGGTTATTCTTCAAGTATTCCCGCAAATGAATCTGCTGATTCTGACTCTGTAGAATGCAACCCTGGATCATCCAACGTAGATCTCAGCTGTAGCTACTCAGAGCCAGTGTCCAGAGCTAATTGTGGAATAACTAGTGGGCCAAAAATTGAGAATTCTAGCCTCAATAGAAAGTTAACTATTGAGCATTGTATAAACAGTGGTGAAATGAGCAGTAGCAGGTTAATCAGAACATCATTTCCGCAAGAAAGTCCATCATGTGGTTCTCTGTGTTATGAACCACCATACCTAGATGGTGCAGTTCCTTTAGATTCTCTTGATCTAAATTATATATGTCGGCATAATGAGTCCGTGTTGTCGCCTATTGGTTTCCGTACTCCAACTAGTATGAAGAGTAGGGAATGGAGAGAGTCACCCGAATCAATATTGAAAAAGGCTGCCAGTACTTATCCAAATACTCCTTCCATATTGAGGAGGAGAAGGACTGCAGTCCAAACACACACCTCTCCGACTAAAGTTTTGAAACTAGATAATGGTTTCCATGCTTCTAATGAACCGGTGAGAGACAAGGATGATTCTGGTTCTGAAGTCGGCATGTGCTCCGAGAGTACAGCAAGACTTGTCAATGAGAGTGACGCTCTCAGCAATAAGGTGATCAATGCGTCTCCACCATACCGGTTGAGATCCAAGCGTACAGCGGTTATCAAGTGCGTGGAAAAAAAACTTGAGTTTGCTTTTGACAAAGAGAAGAACGATGACAACGTCATCGAAATGGAAAAATCTGCGAAGAGGAAAAATGTGTTATCTGAAGATTGTCTGCAGGAAACAAATTTGGTAGTGACATAG 1713 0.4238 MNDSIAEMKSEECCQENKQSTAASCSSVSEGCGSAIHKSTTIRSPAPTSPSHRRTTGPIRRAKGGWTAQEDETLRNAVAAFKGKSWKKIAEYFPDRSEVQCLHRWQKVLNPELVKGPWTQEEDDKIVELVSEHGPTKWSLIAKALPGRIGKQCRERWHNHLNPDIKKDAWTMEEELTLMNAHGTHGNKWAEIAKVLPGRTDNAIKNHWNSSLKKKLDFYTATGRLPPISKNNTQITVKDSIRQSVNETLLVCSNKELNAAIETSSETTAISKLDDSSKNQLESSGTAREVGYSSSIPANESADSDSVECNPGSSNVDLSCSYSEPVSRANCGITSGPKIENSSLNRKLTIEHCINSGEMSSSRLIRTSFPQESPSCGSLCYEPPYLDGAVPLDSLDLNYICRHNESVLSPIGFRTPTSMKSREWRESPESILKKAASTYPNTPSILRRRRTAVQTHTSPTKVLKLDNGFHASNEPVRDKDDSGSEVGMCSESTARLVNESDALSNKVINASPPYRLRSKRTAVIKCVEKKLEFAFDKEKNDDNVIEMEKSAKRKNVLSEDCLQETNLVVT 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1590 570 PANTHER MYB-RELATED PROTEIN B-LIKE 27 484 - -
Lal9g1590 570 MobiDBLite consensus disorder prediction 36 67 - -
Lal9g1590 570 MobiDBLite consensus disorder prediction 471 485 - -
Lal9g1590 570 ProSiteProfiles Myb-like domain profile. 58 109 IPR001005 -
Lal9g1590 570 ProSiteProfiles Myb-like domain profile. 162 212 IPR001005 -
Lal9g1590 570 MobiDBLite consensus disorder prediction 265 310 - -
Lal9g1590 570 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 109 IPR017930 -
Lal9g1590 570 SUPERFAMILY Homeodomain-like 112 208 IPR009057 -
Lal9g1590 570 Gene3D - 168 244 - -
Lal9g1590 570 Gene3D - 62 114 - -
Lal9g1590 570 MobiDBLite consensus disorder prediction 36 55 - -
Lal9g1590 570 CDD SANT 117 161 IPR001005 -
Lal9g1590 570 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 166 216 IPR017930 -
Lal9g1590 570 PANTHER MYB PROTEIN-RELATED 27 484 - -
Lal9g1590 570 ProSiteProfiles Myb-like domain profile. 110 161 IPR001005 -
Lal9g1590 570 SUPERFAMILY Homeodomain-like 60 116 IPR009057 -
Lal9g1590 570 MobiDBLite consensus disorder prediction 465 487 - -
Lal9g1590 570 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 110 165 IPR017930 -
Lal9g1590 570 CDD SANT 66 109 IPR001005 -
Lal9g1590 570 SMART sant 114 163 IPR001005 -
Lal9g1590 570 SMART sant 166 214 IPR001005 -
Lal9g1590 570 SMART sant 62 111 IPR001005 -
Lal9g1590 570 Gene3D - 115 166 - -
Lal9g1590 570 CDD SANT 169 212 IPR001005 -
Lal9g1590 570 Pfam Myb-like DNA-binding domain 167 210 IPR001005 -
Lal9g1590 570 Pfam Myb-like DNA-binding domain 115 161 IPR001005 -
Lal9g1590 570 Pfam Myb-like DNA-binding domain 63 109 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1590 Lal-Chr9 18266652 18272175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1590 1 549 MYB Transcription Factor Family AT3G09370 46.536 9.54e-144 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lal9g1590 Myb_DNA-binding 2.8e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1590 K09422 - gmx:778081 833.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g1590 9 18266652 18272175 Lal9g1590 9 18266652 18272175 ECH