Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1583 ATGTCCCAAACAGGTTCTTCATCAAGATGGAGCCCTACAACTGAGCAACTCATGATCTTGGAGGAACTATATAGGAGTGGAATTAGAACTCCTAGTGCTTCTCAAATTCAGCAAATAACAACTCAACTTTCTTTCTATGGAAGAATAGAAGGAAAGAATGTGTTCTATTGGTTTCAGAATCACAAAGCTAGGGATAGACAAAAGCTAAGGAGAAAACTCAACATGCAACTTCAGCTACAGCAACAACTGCAGATTCAGCAGCATTACCAACAACTCAATCATGATATTAGTAACCATTTTGTTGGTAACTTTTGTTACCCATATTGCTCTACTCCAAAAGAATTTTCCCCTTTTAACTCAAGTAGCTTGTTTTTTCAGGGAGGAATTGCAAACACATCACAAAGGGGCATGAATTTCAAATGGGGTGTGTATAATCCACAAAGCTTGGTGGAGAAGAAAGATATGAAATTTTGCAACAATGGTTGGACATTAATGGATGCTAATAATCAACCATCTTCATGTTGCACTAAAATTCTCAAGACTCTTGATCTCTTTCCACTCACAACTATAAGGACCAAAGAAGACAACACCATCACTACACATCAACCATCTTCATGTGACATGTGA 627 0.3764 MSQTGSSSRWSPTTEQLMILEELYRSGIRTPSASQIQQITTQLSFYGRIEGKNVFYWFQNHKARDRQKLRRKLNMQLQLQQQLQIQQHYQQLNHDISNHFVGNFCYPYCSTPKEFSPFNSSSLFFQGGIANTSQRGMNFKWGVYNPQSLVEKKDMKFCNNGWTLMDANNQPSSCCTKILKTLDLFPLTTIRTKEDNTITTHQPSSCDM 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1583 208 Pfam Homeodomain 7 67 IPR001356 GO:0003677
Lal9g1583 208 ProSiteProfiles 'Homeobox' domain profile. 3 68 IPR001356 GO:0003677
Lal9g1583 208 SUPERFAMILY Homeodomain-like 8 68 IPR009057 -
Lal9g1583 208 Gene3D - 2 68 - -
Lal9g1583 208 SMART HOX_1 5 72 IPR001356 GO:0003677
Lal9g1583 208 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 197 IPR044555 GO:0003700|GO:0099402
Lal9g1583 208 PANTHER WUSCHEL-RELATED HOMEOBOX 3 1 197 - -
Lal9g1583 208 CDD homeodomain 9 68 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1583 Lal-Chr9 18180262 18181550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1583 6 73 Wox Gene Family AT2G28610 83.824 2.49e-37 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lal9g1583 Homeodomain 3.3e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1583 - - gmx:102663963 243.817