Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1580 ATGTCTAGTGCATCATACCCACCACCACCACCATTTTATAGACTCTACAAAAATTACTCACAGGATCCTAATTCTGCTCCTTCTCCTCCTCCTCCAATTGAAGGCACTTACATTTGTTTTGGTGCTACTCACACTTGGCTGGGTGGTGTGATTGAAGCCAAGAGTGGGTGCAAATTGGGACAGTGGCTGAATGTGTTCAGTTCTGTCATTGTTCTCTTTCTTGATGCATCTGATTTATTCTCCTCCTTCGCTTGTTCTGTGTTTGTGGTGAACAACTCATTATTGTTGTGTATTTGTGCTGCTGCCTGGTCTGGACTTGCTTTTATTTGTGCTGTTGTGGTGGTGGGTCTAGTGCTGACCGATAATGTTCTTCCAAGCTTGGAAGAACAAGGGGTGCGCCAACTCTATCCTAAGGGGCCTAATGTTGATTACAAGAAGGAGCTGAGATCTCTGGTTGGAGAATTGCTGCTACACCTTTTGGAGCTGGCTGATATTCTTATTCAGAGACCATCTCAGTTTGCAAGGAGAGTTGAGGAAATTTCAACTGTATACAAAAACATGCATCACCTTTTGAATTCAATGCGTCCTCATCAGGCGAGGGCAACACTAATTCACATCATGGAGCTTCAGATACAGCGCCGCAAAGAAGCATTGGAGGACATAAAAAGGAGGAGAGAAGAATCACAAAAACTCCTTAATGAGTCTCTGGCAGCACTTGATGGCAATTAG 729 0.4403 MSSASYPPPPPFYRLYKNYSQDPNSAPSPPPPIEGTYICFGATHTWLGGVIEAKSGCKLGQWLNVFSSVIVLFLDASDLFSSFACSVFVVNNSLLLCICAAAWSGLAFICAVVVVGLVLTDNVLPSLEEQGVRQLYPKGPNVDYKKELRSLVGELLLHLLELADILIQRPSQFARRVEEISTVYKNMHHLLNSMRPHQARATLIHIMELQIQRRKEALEDIKRRREESQKLLNESLAALDGN 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1580 242 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 2 46 IPR009244 GO:0003712|GO:0006357|GO:0016592
Lal9g1580 242 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 119 241 IPR009244 GO:0003712|GO:0006357|GO:0016592
Lal9g1580 242 SUPERFAMILY Mediator hinge subcomplex-like 140 233 IPR037212 GO:0016592
Lal9g1580 242 Pfam MED7 protein 4 231 IPR009244 GO:0003712|GO:0006357|GO:0016592
Lal9g1580 242 Gene3D - 137 233 IPR044888 -
Lal9g1580 242 Coils Coil 204 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1580 Lal-Chr9 18157436 18164410 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Lal9g1580 Med7 1.7e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1580 K15148 - jre:109003137 194.126