Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1576 ATGGCTGTTATGAGGATTTTCTCTCTCTACATTTCTATCACATTCTTCTTCCTTTGCAAAACCAGCACCTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTATTCTTCTTCTGATGTTGAACTTCTCTTAGTAAAAATCAAACCTTCTTTAAAAGGCAACACTGAAAACCTTGTTCTCTCTTCATGGAACTCCTTTACACCACTCTGCCAATGGAAAGGACTCAAATGGGTCTTCTCAAATGCTTCTCTTCTTTCATGCAGTCACTTATCATCACCACAATGGACCAATCTCTCACTCCACAAAGACCCTTCCTTGTACCTTTTCTCTCTTCATCTCCCTTCTGTAAATCTCTCTGGTTATCTACCCAGAGAGATTGCTGAGTTCTCTATGCTTCAAAGTCTGTATCTTGATATCAACTCTTTGAAAGGGACAATCCCTTATGAGCTTGGTTACACTTACTCTCTCTCTGATATTGATTTGAGTTACAACTTTTTCATTGGGGTTATTCCTCCTTCTATTTGGAACTTGTGTGAAAGTGAAAAGCTTGTTTCTCTTAAGCTTCATGGTAATTCATTAACTGGGTCTGTTTCTGAACCAGCATTGCCTAACTCTTCCTGTAGTAATTTGCAGTTTCTTGATTTTGGTAGTAACAAGTTTTCTGGTGATTTCCCTGATTTTGTTACAAAGTTTGGTGCTTTAAAAGAGCTTGATTTAGGGGATAATATGTTTGTGAGCACAATTCCTCAAAGCCTAGCTGGGTTAAGGCTTGAAAAATTGAACCTTTCTCATAATAATTTTAGTGGAGTTTTGCCTTATTTTGGAGAATCAAAATTTGGTTTTGATGCTTTTGAAGGGAATAACCCTGGCTTGTGTGGGCCTCCTTTGAAAAGTTGTGGTAATAACTCTTCATTGAGTTCTGGTGCAGTTGCTGGTATAGTTATAAGTCTGATGACAGTTTCTGTGGTTTTGGCTTCTTTGTTAATTGGTTATTTTCAGAATAAAAGGAGGAAAGGTAGTGTAGAGAGTGAAGATGAATTGAATGATGATGATGATTTAGAAGAAGAAATAGATGAAGAAAGTGGTGGTGGTGGTGAGGGGAAGCTTATGATTTTCTCTGGTGGTGAGAATTTGACATTAGAAGATGTGTTGAATGCAAGTGGACAAGTTATGGAAAAGACATGTTATGGAACTGCTTATAAGGCAAAGCTTGTTGATGGAAGCACCATTGCTTTGAGGTTATTGAGAGAAGATAGCTGCAAGGATAAGAATTCATGTTTGCTAGTTATAAAGCAGTTGGCAAAAATTCGGCACGAGAATTTGATTCCTTTGAGAGCTTTCTATCAAGGGAAGAGAGGGGAGAAGCTCCTTATTTATGACTATCTTCCTCTCAGAACCCTTCATGATCTTTTACATGAAATTAAAGCAGGAAGACCAGAGCTGAACTGGGCTAGGAGGCACAAGATAGCATTGGGTATAGCCAGAGGGCTAGCTTATCTTCATACAGGACTCGATGTTCCAATCACCCACGCGAACGTAAGAACCAAGAACGTGCTTGTGGACGACTTCTTTGTTGCCAGGCTCACTGATTTCGGCCTCGATAAGCTGATGATTCCTTCCGTAGCTGATGAAATGGTTGCACTTGCAAAGACAGACGGGTACAAGGCTCCAGAGCTTAAGGAAATGAAGAGATGTAACAGCAGGACCGATGTTTATGCATTTGGTATACTATTGTTGGAAATCTTGATCGGCAAGAAACCAGGTAGAAACGGAAGGAATAGCGAGTTTATGGATTTGCCTTCGATCGTGAAAACAGCGGTTCTGAAGGAAACTACAATGGAAGTGTTCGATGTGGAACTCTTGAAAGGGATAAGAAGTCCAATGGAAGATGGGTTGGTTCCGGCATTGAAGCTTGCAATGGGATGCTGTGCTCCAATGGCATCAGTTAGACCAAGCATGGAAGAAGTTGTGAGGCACTTGGAGGAGAATAGACCAAGGAACAGGTCTGCTTTATATAGTCCTACAGAAACAAGAAGTGGAAGCATTACCCCATTTTCATAA 2067 0.4011 MAVMRIFSLYISITFFFLCKTSTFSSSSSSSSSSSSYSSSDVELLLVKIKPSLKGNTENLVLSSWNSFTPLCQWKGLKWVFSNASLLSCSHLSSPQWTNLSLHKDPSLYLFSLHLPSVNLSGYLPREIAEFSMLQSLYLDINSLKGTIPYELGYTYSLSDIDLSYNFFIGVIPPSIWNLCESEKLVSLKLHGNSLTGSVSEPALPNSSCSNLQFLDFGSNKFSGDFPDFVTKFGALKELDLGDNMFVSTIPQSLAGLRLEKLNLSHNNFSGVLPYFGESKFGFDAFEGNNPGLCGPPLKSCGNNSSLSSGAVAGIVISLMTVSVVLASLLIGYFQNKRRKGSVESEDELNDDDDLEEEIDEESGGGGEGKLMIFSGGENLTLEDVLNASGQVMEKTCYGTAYKAKLVDGSTIALRLLREDSCKDKNSCLLVIKQLAKIRHENLIPLRAFYQGKRGEKLLIYDYLPLRTLHDLLHEIKAGRPELNWARRHKIALGIARGLAYLHTGLDVPITHANVRTKNVLVDDFFVARLTDFGLDKLMIPSVADEMVALAKTDGYKAPELKEMKRCNSRTDVYAFGILLLEILIGKKPGRNGRNSEFMDLPSIVKTAVLKETTMEVFDVELLKGIRSPMEDGLVPALKLAMGCCAPMASVRPSMEEVVRHLEENRPRNRSALYSPTETRSGSITPFS 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1576 688 MobiDBLite consensus disorder prediction 670 688 - -
Lal9g1576 688 Pfam Leucine rich repeat 210 269 IPR001611 GO:0005515
Lal9g1576 688 Gene3D Phosphorylase Kinase; domain 1 380 463 - -
Lal9g1576 688 ProSiteProfiles Protein kinase domain profile. 387 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g1576 688 MobiDBLite consensus disorder prediction 666 688 - -
Lal9g1576 688 Gene3D Ribonuclease Inhibitor 43 180 IPR032675 -
Lal9g1576 688 Gene3D Ribonuclease Inhibitor 183 303 IPR032675 -
Lal9g1576 688 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 8 687 - -
Lal9g1576 688 SUPERFAMILY Protein kinase-like (PK-like) 397 663 IPR011009 -
Lal9g1576 688 SUPERFAMILY L domain-like 78 276 - -
Lal9g1576 688 MobiDBLite consensus disorder prediction 342 367 - -
Lal9g1576 688 MobiDBLite consensus disorder prediction 347 363 - -
Lal9g1576 688 Pfam Protein kinase domain 398 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g1576 688 Gene3D Transferase(Phosphotransferase) domain 1 465 679 - -
Lal9g1576 688 PANTHER KINASE-LIKE PROTEIN TMKL1-RELATED 8 687 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1576 Lal-Chr9 18097071 18100441 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1576 10 687 Receptor kinase-like Gene Family AT3G24660 69.219 0.0 886
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal9g1576 Pkinase 2.4e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1576 - - gmx:100814814 1031.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1802 2 20263348 20266992 Lal9g1576 9 18097071 18100441 LSH