Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1574 ATGTCTGATGAGCAAAGAAGCTCAAAAGATTCAATGTTCAAAGATCAGAATGACATTAATGATCTTGTGTCAAGGTTACAACTACTTCTGCCTCAACTTAACCAAAGAAACAACTCAAGAAGGCAACCGGTGTCTAAAATCTTGCAGGAAACATGCAGTCACATTAAGAATTTGCAGAATGCAGTGGAAGATCTCAGTGAAAAGCTAACAAAATTAATGGATTCTATGGATATTAGTGATATAGATAGAAAAGTTATAGAAGACTTTCTCCAACAATAA 279 0.3441 MSDEQRSSKDSMFKDQNDINDLVSRLQLLLPQLNQRNNSRRQPVSKILQETCSHIKNLQNAVEDLSEKLTKLMDSMDISDIDRKVIEDFLQQ 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1574 92 Coils Coil 48 75 - -
Lal9g1574 92 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 17 74 IPR036638 GO:0046983
Lal9g1574 92 Pfam Helix-loop-helix DNA-binding domain 17 59 IPR011598 GO:0046983
Lal9g1574 92 Gene3D - 14 85 IPR036638 GO:0046983
Lal9g1574 92 PANTHER DNA BINDING PROTEIN 2 92 IPR044172 -
Lal9g1574 92 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 3 58 IPR011598 GO:0046983
Lal9g1574 92 PANTHER DNA BINDING PROTEIN 2 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1574 Lal-Chr9 18080726 18081816 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1574 6 77 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47710 47.222 1.77e-15 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lal9g1574 HLH 5.4e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1574 - - gmx:100790746 80.8777