Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1555 ATGTCAAGTTTGGACAACAATCGAGAAAAGCTAGCTGGTTTGACCCTTAATGATGTTTTAGCCAACCAAAAGAGATTATCTGGAACGCCACCTAGTGAACCGAAAAATCGAACCCTCCTTGACATCATCAAAGAAGACGAGAGCAACAAAAAGGATAGAAGATCGTGGAAAGCTTTCAAGGACAAGTTGAGAGTAAAGCGTGCAGGCTCTGCTTGGACATCATCGATTCACATTCCAACCTCAGATCCTCTTATTCAATTCCATCACATGTCAACTAACTACAACACTCACCAAGTTGATGATCTCAATTCTTCTCCGACACCGGTAACCAAGCCTCAATTCTCTCGCCGGAGCTCCACCCGTTACGGATCTCCGGGAGATTCTTCTGGTGATGACTCTAGCAGTGTAGTAGGAGGAGGAGGAGCACTCCGACCTATGTTGTCTCGACGAAACTCCACCACGGTGCCTTCCCAATCGGAACCCTACCGGCGAGGGAGAGTGGTGACTTTCCGAGATAGTTTGGAGGATGATGATTCTGACGATGAAATGAATAGTGGTTCTGAAAGGGTAATGTCAGCGAGGGAGGCGGTGGCAGCGCAGGAGGCATCAGAGGCGGCAGCTGCAGAAGCTGAGATGGCGGAGGAGGAGGAGGAGCAACCAATGACAATGTCACTGATGGATTTGTTGGAAGAAACTGATAGAGAAATGGGTCTTGAAGGATCAAGGTATATACTGAGTGATGATGATTTTGATGAAGATGATGATGATGATGAAGGCGATGATGATGATGACGATGATGGAGAAGATGCTATGGAATATACTTGTTGTATTTGCATGGTGAAGCATAAGGGTTCTGCTTTCATAACTTGTGGTCACACTTTTTGTAGAATGTGTTCAAGGGAGCTTAATGTTAGTAGAGGGAATTGTCCTCTATGCAACAATTTCATTTTGGAGGTTCTTCATATTTTCTGA 972 0.4527 MSSLDNNREKLAGLTLNDVLANQKRLSGTPPSEPKNRTLLDIIKEDESNKKDRRSWKAFKDKLRVKRAGSAWTSSIHIPTSDPLIQFHHMSTNYNTHQVDDLNSSPTPVTKPQFSRRSSTRYGSPGDSSGDDSSSVVGGGGALRPMLSRRNSTTVPSQSEPYRRGRVVTFRDSLEDDDSDDEMNSGSERVMSAREAVAAQEASEAAAAEAEMAEEEEEQPMTMSLMDLLEETDREMGLEGSRYILSDDDFDEDDDDDEGDDDDDDDGEDAMEYTCCICMVKHKGSAFITCGHTFCRMCSRELNVSRGNCPLCNNFILEVLHIF 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1555 323 MobiDBLite consensus disorder prediction 242 266 - -
Lal9g1555 323 Pfam Zinc finger, C3HC4 type (RING finger) 273 317 - -
Lal9g1555 323 SMART ring_2 275 312 IPR001841 -
Lal9g1555 323 PANTHER OS01G0917900 PROTEIN 5 323 - -
Lal9g1555 323 Coils Coil 196 219 - -
Lal9g1555 323 MobiDBLite consensus disorder prediction 96 135 - -
Lal9g1555 323 MobiDBLite consensus disorder prediction 96 221 - -
Lal9g1555 323 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 250 323 IPR013083 -
Lal9g1555 323 CDD RING-HC 275 312 - -
Lal9g1555 323 ProSiteProfiles Zinc finger RING-type profile. 275 313 IPR001841 -
Lal9g1555 323 MobiDBLite consensus disorder prediction 246 266 - -
Lal9g1555 323 SUPERFAMILY RING/U-box 274 319 - -
Lal9g1555 323 PANTHER OS01G0917900 PROTEIN 5 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1555 Lal-Chr9 17891252 17895118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1555 1 323 C3H Transcription Factor Family AT3G07120 37.119 7.29e-58 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1555 - - lang:109359938 465.307