Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1549 ATGGTTTCACTAAAAGTAAATGAAAAGCTGCTTAAGGAACTTGAATCAATGGGAATTCAACAGGCACATGCAATTCCAGCACTTTATTATTCTGGAAATACTAGCGCAGAGAAAGCTATAAATTGGTTAATTTATCATGACAGTGATGCTGATATTGATGAGAAGCCATTGGTAGATATAGATATTCCTATTGAGTCTATTGAATCATTCCATATCACTGAAGAAATGAGAATCACAGCACAAAAGTTAAGGGGAAAAATGTGTAAGCGGAAAGAGAAGGAAGAAAAGAAAATGGAAAAAGAAAGGGAGAAGGTGGGGCCTGATGCGGTCAAATTAGGCAATCTAATCCAAATGTGGTCTGATGTTGTTGCATTGCAGTACGATGTGATTTGGAGTCACACTGCAATTGCATTAAATAGAAGTTCTATACACTCAATACCCTCAGAAGTTCATGAACCTGTGAGATCTTCTGCTACAGCAGTAAGGGAAAATAAGAGTTTGAAACTTGATCACTTAAGAGAATGTTTGAGGTCCCTCAAGTACAATCTTCAGGGAGAGAATGCCAGAGTCATAAGGGCCTTCGAAACTCTTCGAATTTATGTAGGAAATGTTGCCAAGAATCCTGATGAGGAAAAATACAGAAAGATCAGACTGAGCAACCCAGTATTTCAGGAGAGAATTGGGAGTTTAAAGGATGGCATGAAGTTTCTTGAGCTTTGTGGATTTGAGAGAAGAGGTGACTTCTTGTATCTTCCTTACCAAAAGGTTGACATTACGTTACTAAATTCAGCTGGCTTTGTGTTAAATTCGGCATCGACGAATCCTTTTTTCGGAATTTTAAGTACTTGTCTTCAATTGAATAGAGGTATTGTCTTTTATATGATTATCAACCTTCTTCTTTACCTTTCTACTTTATAG 918 0.3715 MVSLKVNEKLLKELESMGIQQAHAIPALYYSGNTSAEKAINWLIYHDSDADIDEKPLVDIDIPIESIESFHITEEMRITAQKLRGKMCKRKEKEEKKMEKEREKVGPDAVKLGNLIQMWSDVVALQYDVIWSHTAIALNRSSIHSIPSEVHEPVRSSATAVRENKSLKLDHLRECLRSLKYNLQGENARVIRAFETLRIYVGNVAKNPDEEKYRKIRLSNPVFQERIGSLKDGMKFLELCGFERRGDFLYLPYQKVDITLLNSAGFVLNSASTNPFFGILSTCLQLNRGIVFYMIINLLLYLSTL 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1549 305 SMART PGNneu 192 253 - -
Lal9g1549 305 Coils Coil 83 103 - -
Lal9g1549 305 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 5 46 IPR015940 -
Lal9g1549 305 PANTHER PUB DOMAIN-CONTAINING PROTEIN-RELATED 132 282 - -
Lal9g1549 305 PANTHER PUB DOMAIN-CONTAINING PROTEIN-RELATED 1 104 - -
Lal9g1549 305 Pfam PUB domain 190 256 IPR018997 -
Lal9g1549 305 Gene3D - 8 53 - -
Lal9g1549 305 SUPERFAMILY UBA-like 3 57 IPR009060 GO:0005515
Lal9g1549 305 Gene3D - 165 270 - -
Lal9g1549 305 SUPERFAMILY PUG domain-like 186 276 IPR036339 -
Lal9g1549 305 PANTHER F13M7.16 PROTEIN 132 282 - -
Lal9g1549 305 PANTHER F13M7.16 PROTEIN 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1549 Lal-Chr9 17841512 17847588 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1549 1 280 C2H2 Transcription Factor Family AT1G04850 40.453 2.18e-58 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1549 - K24348 gmx:100781260 281.182