Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1548 ATGGGTAAGTTTGAACTAGTTGAAAAAGTTGTAATTGTTCCTGAAAAACCAACACCCTATAAGCAAATATTCTTGTCAAATATTGACCTGACCCTTGTTGTGTACCAAGACTCTGCTTCATTTTTTGACCCTCCAAGTTGTCCAATGAGCTTCTATGAGATTTATAGCAAACTATTCAGTGCACTTAGTAAAATGCTTGTGCATTATGGCTTTATGGCTGGCCGATTAGTGTCAAGTTTGGAGGACAATCATCGGTTTGAAATAGACTGTAACGATGCGGGTATCGTGGTTGCTGCTGCAAGAACTGATAGAAAGCTGAGTGAATTTGGTGTCATTTCTGCACCGAATCCGGAGTTAAGAGAATTGATAGTTTTCTTGGTTGATGAGGGTGAAGAAGAAACTGAACTCAAAGACAAGCCTCTTGCATCTTTACAGCTGACACAGTTTAGCTGTGGAAGTTTGGCACTTGCTTCTCATTACAACCACTGCATACTAGACGGTGTAGCAGTGAGAGATTTTGAGGCGAATTTGGCTGCATTAACACGCGGTGATGATTTCATCATAATACCTGATCCAAATAGGACACCACTAAGATCTCGAATCCCTCCGAAGATAAGTCATCCACATCATGAGTATTCAAAATCTGTTGACATAGTTAACTTGTTTACGGTTCGCGGCACAAGTGGAACTAATGCTAGACACTTGATGACAGAAAACCAAATCCATGTGCTTCATTTATCACCGCAACACATTGCCAGCTTCAAAAAGAAAGCTCTGAAAGACACCAACTTAAAGAATAGCACCACTTTTCAAGTTGTTGCTGCGAAAATATGGAAGGCGAGAAGTATTGCAACGAAGATGGCAGAGGATAAGGTATCCACAATGTTGTTTCCCGTGGATGCGAGGAAAAGGGTTGTTCCTGAACTTCCAGACGGCTTCGCAGGAAATGCATTGGTTCCGGGCTATGCAAGAGCAACCGTGAGGGAGCTTATGGAATTGGAAGATGCTTATCACATAAGGAAAGTGCAAGAAGGTATCGAAAGACTCAATGACGAGTACATTAAATCGGGTATAGATTGGTTAGAAGTGAACAAAGGGGTGCCTTGTAGGGAAGATAGTTTCTCCTTGGTGGCATGGTGGAGGTTGGGGCTAGAGGAACAACATTTTGCATGGGGCAGACTAAAATGTGCTACTCCACTTGCAGTTAAGCCGGGTTTGGTCATTTTATTGCCAGGAGCACAAGATCAAGGGGGTCTTAGTATATGTCTTGATTTACCTGATGATCAAATGCAAGAGTTTTCTAGGATAATGCTACAAGTTTAG 1323 0.4203 MGKFELVEKVVIVPEKPTPYKQIFLSNIDLTLVVYQDSASFFDPPSCPMSFYEIYSKLFSALSKMLVHYGFMAGRLVSSLEDNHRFEIDCNDAGIVVAAARTDRKLSEFGVISAPNPELRELIVFLVDEGEEETELKDKPLASLQLTQFSCGSLALASHYNHCILDGVAVRDFEANLAALTRGDDFIIIPDPNRTPLRSRIPPKISHPHHEYSKSVDIVNLFTVRGTSGTNARHLMTENQIHVLHLSPQHIASFKKKALKDTNLKNSTTFQVVAAKIWKARSIATKMAEDKVSTMLFPVDARKRVVPELPDGFAGNALVPGYARATVRELMELEDAYHIRKVQEGIERLNDEYIKSGIDWLEVNKGVPCREDSFSLVAWWRLGLEEQHFAWGRLKCATPLAVKPGLVILLPGAQDQGGLSICLDLPDDQMQEFSRIMLQV 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1548 440 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE-LIKE ISOFORM X1 4 438 - -
Lal9g1548 440 Gene3D - 3 214 IPR023213 -
Lal9g1548 440 Gene3D - 231 439 IPR023213 -
Lal9g1548 440 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 438 - -
Lal9g1548 440 Pfam Transferase family 5 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1548 Lal-Chr9 17835636 17845293 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1548 3 440 Monolignol Biosynthesis Gene Families AT5G48930 26.174 4.21e-53 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1548 K15400 - gmx:100801822 702.205