Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1536 ATGTCTATTAGAAAGCTCTCGTTGCCTCGTCTCCTCCTTAACAATGTCTCTTGCATGAGAAATGCCCAGCAAATTCTGCGTAACGTGAATGTCTCTCTTCATGACGGAGGGGCGCTTGTGCTAACAGGTGCAAATGGGTCAGGAAAGACAACTTTCCTGCGCATGCTAGCTGGATTTTCTCGTCCTTCTGCTGGTGAAATCCTTTGGAATGGCCATGATATTCAAGAATCTGGAATTTTTCAGCAGTATAAAGTTCAGCTTAACTGGCTCACTCTTCAAGATGCCATTAAAGAAAAGAGGACAATTTTCTGGAACGTTAACTTTTTTGAACATCTTGAAAGCAAGAAAGGGAGGGCTCTGCCTGCACTTCAGTTGATGGGACTAGGAAGATTGGTCAACGAAATGCCAAAGATGTTGTCAATGGGCCAACGGAAAAGACTGCAACTTGCAAGATTGCTGGCAATGGATCGCCCTATATGGTTGCTAGATGAGCCTTCAGTTGCATTAGATGATGAAGGTGTGAAGTTACTTGAGTATATTATTGCAGAACATAGGAAACAAGGAGGGATTGTGATCGTGGCAACTCATTTGCCCATCAAGATGGAAGACCCCATGATCTTGAGGTTACCACCAAGATTTCCAAGGAAGATGACTTTAGTCGACATGCTTGACCGTGCAGATATTAACTTGCAGGCTGATGCATTCTGCCTGAGGCATTCGATTGAGAATGCGGGGTCATATTGGCTCACTTGGATCAATTTTGCCAGAGCCCTTATGGCTTCAGCCACAGATCCTGGCCACACACCTTCTTCCCCACCTCCATATACTCCACTGCATACAGTCTCTCCTACCTTTTCTTTGCCTATTCCCACCACCAAACTCACTGAAAAGAACTACCTCACATGGTGGCAGCCTTAA 918 0.451 MSIRKLSLPRLLLNNVSCMRNAQQILRNVNVSLHDGGALVLTGANGSGKTTFLRMLAGFSRPSAGEILWNGHDIQESGIFQQYKVQLNWLTLQDAIKEKRTIFWNVNFFEHLESKKGRALPALQLMGLGRLVNEMPKMLSMGQRKRLQLARLLAMDRPIWLLDEPSVALDDEGVKLLEYIIAEHRKQGGIVIVATHLPIKMEDPMILRLPPRFPRKMTLVDMLDRADINLQADAFCLRHSIENAGSYWLTWINFARALMASATDPGHTPSSPPPYTPLHTVSPTFSLPIPTTKLTEKNYLTWWQP 305
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1536 305 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 196 IPR027417 -
Lal9g1536 305 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 11 235 IPR003439 GO:0005524
Lal9g1536 305 SMART AAA_5 35 223 IPR003593 -
Lal9g1536 305 Gene3D - 6 202 IPR027417 -
Lal9g1536 305 PANTHER ABC TRANSPORTER I FAMILY MEMBER 1 8 223 IPR005895 GO:0017004|GO:0022857
Lal9g1536 305 Pfam ABC transporter 26 166 IPR003439 GO:0005524
Lal9g1536 305 TIGRFAM ccmA: heme ABC exporter, ATP-binding protein CcmA 13 206 IPR005895 GO:0017004|GO:0022857
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lal9g1536 Lal-Chr9 17727277 17730053 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1536 24 196 Calmodulin-binding Proteins AT2G36910 24.868 1.81e-11 63.2
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1536 - - nau:109226449 377.867