Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1534 ATGGAAAATCAATTATTTCTCAATGCTCAAATGTTCCAATCACTTCATTCATCATCATCATCATCTACTATAGATTTTCAAGCAACAGTTTTGAATAATTGTCCATCTTCTCAGCAAAACCAACATTGTTTTTACAACAATAAAACAACATGGGATAAGTCAAATGATCATACCCTTCATTTTCATTCACCACTTACTTCAATGCTTTCTTCCCCTTCCAACATGTCAAATGATAATAACAACAATAGTACTAACAACACTTCATGTTATACCACCCCTTTGACTTCTCCTCCAAAAGTCAACAACAACAACAACATCAATAACCACTTGGTCAAACCTATGATGTCCTTGAATTCTTCCACTGTTGGTGAGTTTTCATCTGATCCTGGCTTTGCTGATAGGGCTGCAAAGTTTTCTTGCTTTGGAAGTAAGAGTTTCAATGGTAGGAACAAAAATGATGAATTGACACAAAGATCTAACACTTTTATGGAACATGGAAAGTACACTAGAGTTTCAAGTACTCCATCACTTCAAGTTCTTGGAGTTGGATCTCAAATGGGTATTCAAGAGAACAAGAATTCTCCTAAGGAAGTTTCTAATTCTCAAGAGGAATCTACAATCTCTGAACTAACTCCAAATTCTGACAATGGAGTCAATCCTTCCTCTTATATGAATTCTAGGAAAAGAAAAGGTTCTTCCATAGGAAAAACAAAAGAAACTTCAACCTCTGCCAATCCTGTCATTGTTGTCATGGGCCAAAAGATGCCCTTTAGTTATGGGTCAAAGGGTGGTGAAGAATCAAATGCAAAACGTTACAAGAAAAATGAAGGTGATGGAAATGAAAATGAACCTTTGAAGGAAGAAAAAGAGACCAAATGGGATGCTAGTAATGGAGGTGATGAGAAACAGAACAAAGGTAACTCAAAATCTGATGAACCACCAAAGGATTACATTCATGTTAGAGCAAGAAGAGGCCAAGCTACTGATAGCCATAGTCTTGCAGAAAGAGTAAGGAGGGAAAAAATTAGTGAGAGGATGAAACTTCTCCAAGATCTTGTACCAGGTTGTAATAAGGTCACTGGAAAAGCACTTATGCTTGATGAAATTATAAACTATGTTCAGTCATTACAACGCCAAGTTGAGTTCCTTTCTATGAAATTGGCTACTGTTAACACCAGGCTGGATTTTAGTATTGAGAGCCTAATCTCAAAAGATATTTTCCAATCAAATAATTCTTTAGCACACCCAACATTTCCACTAAATTCCTTAGCAGAAGGGTTTTATGGACAAGTACAGCAACAGAACTCAGAAATCCACAATAACATTCCTAATGAAACTGTTACCCATAACTCAGTGGACCCATTAGATACTAGTCTATGCCAAACCATTGATACTATGCAATTACCTTCCATTAATGGATTTAATGAAAGTGGCTTTCAGTATCCAATAGAATTCTCTGGGGATGATCTCCACACAATTGTTGAGATGGGATTTGGCCAAATTGCAAATAGGAAATCACCACAATCCCAAAGTTTCAATGGTTCAAATCAAGTACCCATATGA 1563 0.364 MENQLFLNAQMFQSLHSSSSSSTIDFQATVLNNCPSSQQNQHCFYNNKTTWDKSNDHTLHFHSPLTSMLSSPSNMSNDNNNNSTNNTSCYTTPLTSPPKVNNNNNINNHLVKPMMSLNSSTVGEFSSDPGFADRAAKFSCFGSKSFNGRNKNDELTQRSNTFMEHGKYTRVSSTPSLQVLGVGSQMGIQENKNSPKEVSNSQEESTISELTPNSDNGVNPSSYMNSRKRKGSSIGKTKETSTSANPVIVVMGQKMPFSYGSKGGEESNAKRYKKNEGDGNENEPLKEEKETKWDASNGGDEKQNKGNSKSDEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLATVNTRLDFSIESLISKDIFQSNNSLAHPTFPLNSLAEGFYGQVQQQNSEIHNNIPNETVTHNSVDPLDTSLCQTIDTMQLPSINGFNESGFQYPIEFSGDDLHTIVEMGFGQIANRKSPQSQSFNGSNQVPI 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1534 520 MobiDBLite consensus disorder prediction 185 248 - -
Lal9g1534 520 PANTHER BHLH TRANSCRIPTION FACTOR 23 79 - -
Lal9g1534 520 PANTHER BHLH TRANSCRIPTION FACTOR 79 517 - -
Lal9g1534 520 Gene3D - 323 398 IPR036638 GO:0046983
Lal9g1534 520 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 326 376 IPR011598 GO:0046983
Lal9g1534 520 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 79 517 IPR024097 GO:0006355
Lal9g1534 520 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 23 79 IPR024097 GO:0006355
Lal9g1534 520 CDD bHLH_AtBPE_like 316 401 - -
Lal9g1534 520 MobiDBLite consensus disorder prediction 68 100 - -
Lal9g1534 520 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 324 395 IPR036638 GO:0046983
Lal9g1534 520 Pfam Helix-loop-helix DNA-binding domain 330 377 IPR011598 GO:0046983
Lal9g1534 520 Coils Coil 373 393 - -
Lal9g1534 520 MobiDBLite consensus disorder prediction 185 315 - -
Lal9g1534 520 SMART finulus 332 382 IPR011598 GO:0046983
Lal9g1534 520 MobiDBLite consensus disorder prediction 266 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1534 Lal-Chr9 17702877 17706513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1534 1 477 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 37.475 2.82e-77 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lal9g1534 HLH 4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1534 - - gmx:100812081 590.497