Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1531 ATGAACAACGGCGATGATAATAATAACCACCGCAACCTCATCATACCGACCACCGTGTTGGACTTTCATAACATCAAAATAATATCCGCCGTGGGACGCGGCGCCAAAGGCGTCGTGTTCCTGTCAAAAGTAAAAGCAAAATCAATAACTCACGAGGACGACGTTTCGAAAAAGGAACCGTGGATAGCATTGAAACTTATTTCTAAAGCGTTGCTTCAAAAGAAGAACAAGAACAACGGCGAGTGCAAGAGGGTGTTGTTCGAACAACAAATACTACGACGTTTCGATCATCCCTTGTTGCCACGGTTACGAGGGATTTTGGAAACGGAACAACTCACTGGGTATGCCATTGATTTTTGCCATGGTGGGAACATGCATTCTCTACGTAAGAAGCAATCTGAAAAGACATTCTCTGAAGAAATCATAAGGTTTTATGCTGTGGAATTGGTGTTAGTATTGGAGTATTTGCACAATCTTGGAGTTGTGTATAGAGATTTGAAGCCAGAGAATATCATGATTCAAGAAACGGGTCACATTATGCTTGTTGATTTCGACCTCTCTAAGAAGCTGAATTCAATTTCACCACAATCACTGAGTTGCAACTCGTCACCAAGTTCTGACTCGGGAACTCAGAACCGTCGTAGAAAGTTTCGCCACCGATGGTTCTCACGATTCTACTGTAAATGTAACTCAGGTATTTTTCCTTACGACTCAGACGGTCAACTCAGTTCAAACTCATCACCGAGTCGGAACGAGTCAAACTCGGTGGAAAAATCTAACTCGTTCGTTGGAACGGAGGATTACGTGGCACCTGAGGTTATTTCAGGAAATGGACATAACTTCGGTGTTGATTGGTGGTCCCTCGGTGTCGTTTTATATGAGATGCTATATGGAACGACACCGTTTAAGGGTACAAATAGAAAGGACACGTTTTTTCGAATTTTAATGAAGGAACCAGATCTAACTGGTGAAACGACGTCGTTGAGGGACTTGATTAGTAAAATGCTTGAGAAAGATCCTGACCGTAGGATTGAGGTAGATGGAATAAAGGGTCATGATTTCTTTAAGGGTGTGAAGTGGAACACAGTATTGGAAATTGCACGTCCACCATATATTCCTCATAATGAAATAGAGGATAGAAAAGGGTTTTCAAAAATAGAGGTTGAATCTTTTATACATGGAATATTTTTCCCAAATAATGTCGAGGGAGAAAAAAATAAAGAGGGGGAGAAGAAAAAATGTGAAGGAGAAAATGGTGAGAATAATAAAAATTATAATGATAAACCTGGGTGGGTTGATAAGTTGAACCATAATCCCACTCATAATGAGACTTTTGTAGTTTTTTGA 1347 0.4046 MNNGDDNNNHRNLIIPTTVLDFHNIKIISAVGRGAKGVVFLSKVKAKSITHEDDVSKKEPWIALKLISKALLQKKNKNNGECKRVLFEQQILRRFDHPLLPRLRGILETEQLTGYAIDFCHGGNMHSLRKKQSEKTFSEEIIRFYAVELVLVLEYLHNLGVVYRDLKPENIMIQETGHIMLVDFDLSKKLNSISPQSLSCNSSPSSDSGTQNRRRKFRHRWFSRFYCKCNSGIFPYDSDGQLSSNSSPSRNESNSVEKSNSFVGTEDYVAPEVISGNGHNFGVDWWSLGVVLYEMLYGTTPFKGTNRKDTFFRILMKEPDLTGETTSLRDLISKMLEKDPDRRIEVDGIKGHDFFKGVKWNTVLEIARPPYIPHNEIEDRKGFSKIEVESFIHGIFFPNNVEGEKNKEGEKKKCEGENGENNKNYNDKPGWVDKLNHNPTHNETFVVF 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1531 448 MobiDBLite consensus disorder prediction 402 430 - -
Lal9g1531 448 PANTHER FLIPPASE KINASE 1-RELATED 1 419 - -
Lal9g1531 448 ProSiteProfiles Protein kinase domain profile. 25 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g1531 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Lal9g1531 448 SUPERFAMILY Protein kinase-like (PK-like) 14 389 IPR011009 -
Lal9g1531 448 SMART serkin_6 25 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g1531 448 Gene3D Phosphorylase Kinase; domain 1 26 123 - -
Lal9g1531 448 Pfam Protein kinase domain 255 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g1531 448 Pfam Protein kinase domain 29 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g1531 448 PANTHER SERINE/THREONINE-KINASE OXI1-LIKE PROTEIN 1 419 - -
Lal9g1531 448 MobiDBLite consensus disorder prediction 403 422 - -
Lal9g1531 448 MobiDBLite consensus disorder prediction 240 261 - -
Lal9g1531 448 Gene3D Transferase(Phosphotransferase) domain 1 124 192 - -
Lal9g1531 448 Gene3D Transferase(Phosphotransferase) domain 1 254 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1531 Lal-Chr9 17675454 17677753 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g1531 17 448 AGC Kinase Gene Family AT3G25250 52.009 1.18e-145 420
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lal9g1531 Pkinase 1.9e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1531 K20714 - gmx:100813693 511.531